Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP7Q93009 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP7Q93009 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
USP7Q93009 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP7Q93009 AC007322.4-201ENST00000509611 723 ntBASIC20.18■□□□□ 0.82
USP7Q93009 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.18■□□□□ 0.82
USP7Q93009 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.18■□□□□ 0.82
USP7Q93009 OR10C1-204ENST00000622521 1039 ntBASIC20.18■□□□□ 0.82
USP7Q93009 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.18■□□□□ 0.82
USP7Q93009 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.18■□□□□ 0.82
USP7Q93009 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.18■□□□□ 0.82
USP7Q93009 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP7Q93009 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP7Q93009 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP7Q93009 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP7Q93009 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP7Q93009 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP7Q93009 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP7Q93009 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.17■□□□□ 0.82
USP7Q93009 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.17■□□□□ 0.82
USP7Q93009 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP7Q93009 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.17■□□□□ 0.82
USP7Q93009 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.17■□□□□ 0.82
USP7Q93009 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP7Q93009 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.17■□□□□ 0.82
USP7Q93009 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP7Q93009 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.17■□□□□ 0.82
USP7Q93009 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
USP7Q93009 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.17■□□□□ 0.82
USP7Q93009 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.17■□□□□ 0.82
USP7Q93009 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.17■□□□□ 0.82
USP7Q93009 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
USP7Q93009 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.17■□□□□ 0.82
USP7Q93009 AC120498.10-201ENST00000621827 505 ntBASIC20.17■□□□□ 0.82
USP7Q93009 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP7Q93009 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
USP7Q93009 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP7Q93009 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
USP7Q93009 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
USP7Q93009 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
USP7Q93009 POU5F1P3-201ENST00000428824 1078 ntBASIC20.16■□□□□ 0.82
USP7Q93009 AC093787.1-201ENST00000450396 207 ntBASIC20.16■□□□□ 0.82
USP7Q93009 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 AC069236.1-201ENST00000604339 616 ntBASIC20.16■□□□□ 0.82
USP7Q93009 AC016405.3-201ENST00000607710 860 ntBASIC20.16■□□□□ 0.82
USP7Q93009 AC008175.2-201ENST00000612840 297 ntBASIC20.16■□□□□ 0.82
USP7Q93009 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
USP7Q93009 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP7Q93009 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP7Q93009 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP7Q93009 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.15■□□□□ 0.82
USP7Q93009 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP7Q93009 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP7Q93009 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP7Q93009 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.15■□□□□ 0.82
USP7Q93009 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.15■□□□□ 0.82
USP7Q93009 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP7Q93009 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP7Q93009 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.15■□□□□ 0.82
USP7Q93009 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP7Q93009 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP7Q93009 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP7Q93009 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
USP7Q93009 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.14■□□□□ 0.81
USP7Q93009 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP7Q93009 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP7Q93009 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
USP7Q93009 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP7Q93009 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
USP7Q93009 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP7Q93009 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.14■□□□□ 0.81
USP7Q93009 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.14■□□□□ 0.81
USP7Q93009 AC008687.6-201ENST00000596318 630 ntBASIC20.14■□□□□ 0.81
USP7Q93009 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
USP7Q93009 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP7Q93009 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.14■□□□□ 0.81
USP7Q93009 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USP7Q93009 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP7Q93009 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP7Q93009 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USP7Q93009 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP7Q93009 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.13■□□□□ 0.81
USP7Q93009 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP7Q93009 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP7Q93009 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
USP7Q93009 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USP7Q93009 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.13■□□□□ 0.81
USP7Q93009 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.13■□□□□ 0.81
USP7Q93009 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.13■□□□□ 0.81
USP7Q93009 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.13■□□□□ 0.81
USP7Q93009 AL512625.2-201ENST00000417533 625 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms