Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTF1Q92541 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTF1Q92541 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTF1Q92541 AC092368.3-202ENST00000574180 1591 ntBASIC26.77■■□□□ 1.88
RTF1Q92541 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTF1Q92541 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.77■■□□□ 1.88
RTF1Q92541 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTF1Q92541 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.77■■□□□ 1.88
RTF1Q92541 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.77■■□□□ 1.88
RTF1Q92541 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.77■■□□□ 1.88
RTF1Q92541 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.77■■□□□ 1.88
RTF1Q92541 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTF1Q92541 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTF1Q92541 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTF1Q92541 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.76■■□□□ 1.87
RTF1Q92541 AC026366.1-201ENST00000488803 879 ntBASIC26.76■■□□□ 1.87
RTF1Q92541 AP003097.1-201ENST00000530657 1135 ntBASIC26.76■■□□□ 1.87
RTF1Q92541 PNMA6B-201ENST00000538162 1200 ntBASIC26.76■■□□□ 1.87
RTF1Q92541 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.76■■□□□ 1.87
RTF1Q92541 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.76■■□□□ 1.87
RTF1Q92541 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.76■■□□□ 1.87
RTF1Q92541 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
RTF1Q92541 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTF1Q92541 LINC00565-201ENST00000562710 2331 ntBASIC26.76■■□□□ 1.87
RTF1Q92541 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.75■■□□□ 1.87
RTF1Q92541 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.75■■□□□ 1.87
RTF1Q92541 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RTF1Q92541 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.75■■□□□ 1.87
RTF1Q92541 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RTF1Q92541 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTF1Q92541 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RTF1Q92541 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTF1Q92541 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RTF1Q92541 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTF1Q92541 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
RTF1Q92541 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
RTF1Q92541 AC006058.3-201ENST00000606217 1069 ntBASIC26.74■■□□□ 1.87
RTF1Q92541 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
RTF1Q92541 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTF1Q92541 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTF1Q92541 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
RTF1Q92541 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.74■■□□□ 1.87
RTF1Q92541 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTF1Q92541 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 FEM1AP4-201ENST00000443167 1987 ntBASIC26.73■■□□□ 1.87
RTF1Q92541 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.73■■□□□ 1.87
RTF1Q92541 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.73■■□□□ 1.87
RTF1Q92541 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.73■■□□□ 1.87
RTF1Q92541 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
RTF1Q92541 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.73■■□□□ 1.87
RTF1Q92541 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.73■■□□□ 1.87
RTF1Q92541 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 AC121338.2-201ENST00000622535 1744 ntBASIC26.73■■□□□ 1.87
RTF1Q92541 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTF1Q92541 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
RTF1Q92541 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
RTF1Q92541 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTF1Q92541 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
RTF1Q92541 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RTF1Q92541 PRORSD1P-201ENST00000295112 541 ntBASIC26.72■■□□□ 1.87
RTF1Q92541 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTF1Q92541 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
RTF1Q92541 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTF1Q92541 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTF1Q92541 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.72■■□□□ 1.87
RTF1Q92541 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RTF1Q92541 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTF1Q92541 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTF1Q92541 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTF1Q92541 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 AC027702.1-201ENST00000563810 1770 ntBASIC26.71■■□□□ 1.87
RTF1Q92541 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
RTF1Q92541 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.71■■□□□ 1.87
RTF1Q92541 AC008687.6-201ENST00000596318 630 ntBASIC26.71■■□□□ 1.87
RTF1Q92541 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.71■■□□□ 1.87
RTF1Q92541 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTF1Q92541 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms