Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC44A1Q8WWI5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC44A1Q8WWI5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC44A1Q8WWI5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC44A1Q8WWI5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC44A1Q8WWI5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC44A1Q8WWI5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SLC44A1Q8WWI5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 AC079140.4-201ENST00000507448 529 ntBASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 AC110285.6-201ENST00000617652 491 ntBASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC44A1Q8WWI5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 AC019069.1-201ENST00000610008 1333 ntBASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC44A1Q8WWI5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 SMG8-203ENST00000578922 2178 ntBASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC44A1Q8WWI5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 AC116050.2-201ENST00000612102 1779 ntBASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 AL358852.1-201ENST00000623174 1268 ntBASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SLC44A1Q8WWI5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC44A1Q8WWI5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms