Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.18■■□□□ 1.46
STAG1Q8WVM7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.18■■□□□ 1.46
STAG1Q8WVM7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 PGM5P4-201ENST00000421970 445 ntBASIC24.17■■□□□ 1.46
STAG1Q8WVM7 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.17■■□□□ 1.46
STAG1Q8WVM7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 AL356652.1-201ENST00000615962 565 ntBASIC24.17■■□□□ 1.46
STAG1Q8WVM7 AL589743.5-201ENST00000616611 1050 ntBASIC24.17■■□□□ 1.46
STAG1Q8WVM7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
STAG1Q8WVM7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 KRT8P36-201ENST00000489121 1440 ntBASIC24.16■■□□□ 1.46
STAG1Q8WVM7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
STAG1Q8WVM7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 LSM12P1-201ENST00000411836 588 ntBASIC24.15■■□□□ 1.46
STAG1Q8WVM7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.15■■□□□ 1.46
STAG1Q8WVM7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.14■■□□□ 1.46
STAG1Q8WVM7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
STAG1Q8WVM7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
STAG1Q8WVM7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
STAG1Q8WVM7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
STAG1Q8WVM7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG1Q8WVM7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.14■■□□□ 1.45
STAG1Q8WVM7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.14■■□□□ 1.45
STAG1Q8WVM7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
STAG1Q8WVM7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
STAG1Q8WVM7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
STAG1Q8WVM7 AL121603.2-201ENST00000557373 2117 ntBASIC24.13■■□□□ 1.45
STAG1Q8WVM7 AC007225.1-201ENST00000566331 1836 ntBASIC24.13■■□□□ 1.45
STAG1Q8WVM7 ABHD17AP1-201ENST00000358206 933 ntBASIC24.13■■□□□ 1.45
STAG1Q8WVM7 MYC-209ENST00000641252 345 ntBASIC24.13■■□□□ 1.45
STAG1Q8WVM7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
STAG1Q8WVM7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
STAG1Q8WVM7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
STAG1Q8WVM7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
STAG1Q8WVM7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
STAG1Q8WVM7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
STAG1Q8WVM7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 DUSP5P2-201ENST00000426873 1033 ntBASIC24.12■■□□□ 1.45
STAG1Q8WVM7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 AC091874.3-201ENST00000512672 1195 ntBASIC24.12■■□□□ 1.45
STAG1Q8WVM7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
STAG1Q8WVM7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 FP700111.2-201ENST00000619190 1892 ntBASIC24.11■■□□□ 1.45
STAG1Q8WVM7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.11■■□□□ 1.45
STAG1Q8WVM7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
STAG1Q8WVM7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms