Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SH3RF3Q8TEJ3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.42■■□□□ 1.5
SH3RF3Q8TEJ3 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.42■■□□□ 1.5
SH3RF3Q8TEJ3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.42■■□□□ 1.5
SH3RF3Q8TEJ3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24.42■■□□□ 1.5
SH3RF3Q8TEJ3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SH3RF3Q8TEJ3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SH3RF3Q8TEJ3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SH3RF3Q8TEJ3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 PGM5P4-201ENST00000421970 445 ntBASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 AC142381.4-202ENST00000563973 229 ntBASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 AC233263.1-201ENST00000578059 224 ntBASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 AL049796.1-201ENST00000565336 1766 ntBASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SH3RF3Q8TEJ3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SH3RF3Q8TEJ3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SH3RF3Q8TEJ3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SH3RF3Q8TEJ3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SH3RF3Q8TEJ3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
SH3RF3Q8TEJ3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.39■■□□□ 1.49
SH3RF3Q8TEJ3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.39■■□□□ 1.49
SH3RF3Q8TEJ3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SH3RF3Q8TEJ3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SH3RF3Q8TEJ3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SH3RF3Q8TEJ3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.39■■□□□ 1.49
SH3RF3Q8TEJ3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SH3RF3Q8TEJ3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SH3RF3Q8TEJ3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 AC027702.1-201ENST00000563810 1770 ntBASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 FEM1AP4-201ENST00000443167 1987 ntBASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SH3RF3Q8TEJ3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SH3RF3Q8TEJ3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SH3RF3Q8TEJ3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.35■■□□□ 1.49
SH3RF3Q8TEJ3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.35■■□□□ 1.49
SH3RF3Q8TEJ3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.35■■□□□ 1.49
SH3RF3Q8TEJ3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH3RF3Q8TEJ3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SH3RF3Q8TEJ3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH3RF3Q8TEJ3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SH3RF3Q8TEJ3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms