Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ALMS1Q8TCU4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 AC092053.2-201ENST00000640557 1818 ntBASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 AC026471.6-201ENST00000622954 1905 ntBASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ALMS1Q8TCU4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 MIR1238-201ENST00000408483 83 ntBASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 AC010542.4-201ENST00000563151 1910 ntBASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 AC009947.2-201ENST00000444014 672 ntBASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 AC087388.1-201ENST00000571370 1112 ntBASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ALMS1Q8TCU4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 AC004264.1-201ENST00000608354 794 ntBASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 KRT126P-201ENST00000549467 1181 ntBASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ALMS1Q8TCU4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ALMS1Q8TCU4 MYC-208ENST00000641036 567 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms