Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 AC116050.2-201ENST00000612102 1779 ntBASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.53■■□□□ 1.04
SHKBP1Q8TBC3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 AC105020.6-201ENST00000621523 1217 ntBASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 AC092368.3-202ENST00000574180 1591 ntBASIC21.52■■□□□ 1.04
SHKBP1Q8TBC3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.52■■□□□ 1.03
SHKBP1Q8TBC3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SHKBP1Q8TBC3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SHKBP1Q8TBC3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
SHKBP1Q8TBC3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 UNC93B4-201ENST00000505679 747 ntBASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.51■■□□□ 1.03
SHKBP1Q8TBC3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SHKBP1Q8TBC3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHKBP1Q8TBC3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SHKBP1Q8TBC3 AC026310.3-201ENST00000625186 2373 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms