Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNIP1Q8TAD8 AC139530.1-201ENST00000575312 1977 ntBASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 AC087742.1-201ENST00000575880 1738 ntBASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 MMP23A-201ENST00000234610 1017 ntBASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 AC005829.2-201ENST00000571422 1056 ntBASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.35■□□□□ 0.69
SNIP1Q8TAD8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 AP003071.4-201ENST00000562276 1284 ntBASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 CLDN5-201ENST00000403084 2357 ntBASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNIP1Q8TAD8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNIP1Q8TAD8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNIP1Q8TAD8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNIP1Q8TAD8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SNIP1Q8TAD8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNIP1Q8TAD8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNIP1Q8TAD8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.33■□□□□ 0.69
SNIP1Q8TAD8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNIP1Q8TAD8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNIP1Q8TAD8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.31■□□□□ 0.68
SNIP1Q8TAD8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms