Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 AC093503.3-201ENST00000624917 2352 ntBASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 AP006587.3-201ENST00000525742 1516 ntBASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC197Q8NCU1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC197Q8NCU1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 AC005082.1-201ENST00000413042 2259 ntBASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC197Q8NCU1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC197Q8NCU1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC197Q8NCU1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC197Q8NCU1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCDC197Q8NCU1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC197Q8NCU1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC197Q8NCU1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC197Q8NCU1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC197Q8NCU1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC197Q8NCU1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC197Q8NCU1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC197Q8NCU1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CCDC197Q8NCU1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.27■□□□□ 0.83
CCDC197Q8NCU1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 AC138932.1-201ENST00000534164 6830 ntBASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms