Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LSMEM1Q8N8F7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 NTF6G-201ENST00000591094 616 ntBASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 UBE2DNL-204ENST00000602536 740 ntBASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSMEM1Q8N8F7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.71■□□□□ 0.58
LSMEM1Q8N8F7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LSMEM1Q8N8F7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 MIR2861-201ENST00000636310 90 ntBASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
LSMEM1Q8N8F7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 AL162377.1-201ENST00000618844 1793 ntBASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 AC007322.3-201ENST00000426526 701 ntBASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 MYCNOS-205ENST00000641950 531 ntBASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
LSMEM1Q8N8F7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms