Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 AC027612.3-201ENST00000413684 1047 ntBASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 ZNRF2P3-201ENST00000424200 374 ntBASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 AC079140.4-201ENST00000507448 529 ntBASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLDN22Q8N7P3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 AC092720.2-201ENST00000602388 1665 ntBASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 AC099778.1-201ENST00000568593 1911 ntBASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.6■□□□□ 0.57
CLDN22Q8N7P3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 RARRES2P11-201ENST00000635158 484 ntBASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN22Q8N7P3 KRT87P-202ENST00000534226 1464 ntBASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 KRT16P2-201ENST00000414673 1423 ntBASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN22Q8N7P3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN22Q8N7P3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN22Q8N7P3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 LINC02228-203ENST00000641970 1355 ntBASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN22Q8N7P3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms