Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIML2Q8N7C3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIML2Q8N7C3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIML2Q8N7C3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIML2Q8N7C3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 MIR939-201ENST00000401314 82 ntBASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIML2Q8N7C3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 AF213884.3-201ENST00000563833 479 ntBASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIML2Q8N7C3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.67■□□□□ 0.74
TRIML2Q8N7C3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 AC121338.2-201ENST00000622535 1744 ntBASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIML2Q8N7C3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIML2Q8N7C3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms