Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TTC39CQ8N584 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39CQ8N584 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39CQ8N584 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39CQ8N584 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.78■■□□□ 1.08
TTC39CQ8N584 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39CQ8N584 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39CQ8N584 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39CQ8N584 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39CQ8N584 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39CQ8N584 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39CQ8N584 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TTC39CQ8N584 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39CQ8N584 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
TTC39CQ8N584 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39CQ8N584 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39CQ8N584 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.77■■□□□ 1.08
TTC39CQ8N584 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.77■■□□□ 1.08
TTC39CQ8N584 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.77■■□□□ 1.08
TTC39CQ8N584 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.77■■□□□ 1.08
TTC39CQ8N584 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.77■■□□□ 1.08
TTC39CQ8N584 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.77■■□□□ 1.08
TTC39CQ8N584 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.77■■□□□ 1.08
TTC39CQ8N584 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39CQ8N584 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.77■■□□□ 1.07
TTC39CQ8N584 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TTC39CQ8N584 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39CQ8N584 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.76■■□□□ 1.07
TTC39CQ8N584 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.76■■□□□ 1.07
TTC39CQ8N584 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39CQ8N584 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39CQ8N584 TSPY6P-201ENST00000448518 926 ntBASIC21.76■■□□□ 1.07
TTC39CQ8N584 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.76■■□□□ 1.07
TTC39CQ8N584 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39CQ8N584 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
TTC39CQ8N584 AC105020.6-201ENST00000621523 1217 ntBASIC21.76■■□□□ 1.07
TTC39CQ8N584 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TTC39CQ8N584 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39CQ8N584 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39CQ8N584 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39CQ8N584 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39CQ8N584 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TTC39CQ8N584 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39CQ8N584 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39CQ8N584 FP700111.2-201ENST00000619190 1892 ntBASIC21.75■■□□□ 1.07
TTC39CQ8N584 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.75■■□□□ 1.07
TTC39CQ8N584 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TTC39CQ8N584 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39CQ8N584 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39CQ8N584 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39CQ8N584 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.75■■□□□ 1.07
TTC39CQ8N584 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.75■■□□□ 1.07
TTC39CQ8N584 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.75■■□□□ 1.07
TTC39CQ8N584 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.75■■□□□ 1.07
TTC39CQ8N584 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TTC39CQ8N584 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.75■■□□□ 1.07
TTC39CQ8N584 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39CQ8N584 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39CQ8N584 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39CQ8N584 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39CQ8N584 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39CQ8N584 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39CQ8N584 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39CQ8N584 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 LSM12P1-201ENST00000411836 588 ntBASIC21.74■■□□□ 1.07
TTC39CQ8N584 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.74■■□□□ 1.07
TTC39CQ8N584 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39CQ8N584 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39CQ8N584 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.74■■□□□ 1.07
TTC39CQ8N584 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
TTC39CQ8N584 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39CQ8N584 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.73■■□□□ 1.07
TTC39CQ8N584 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39CQ8N584 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39CQ8N584 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TTC39CQ8N584 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.73■■□□□ 1.07
TTC39CQ8N584 AL109923.1-201ENST00000618799 583 ntBASIC21.73■■□□□ 1.07
TTC39CQ8N584 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TTC39CQ8N584 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39CQ8N584 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39CQ8N584 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39CQ8N584 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.73■■□□□ 1.07
TTC39CQ8N584 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39CQ8N584 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms