Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC00346Q8IVM7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 KRT18P20-201ENST00000548986 1279 ntBASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 AC116050.2-201ENST00000612102 1779 ntBASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.09■□□□□ 0.49
LINC00346Q8IVM7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00346Q8IVM7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00346Q8IVM7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00346Q8IVM7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00346Q8IVM7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00346Q8IVM7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00346Q8IVM7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 KRT19P1-201ENST00000405746 1186 ntBASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 UBE2DNL-204ENST00000602536 740 ntBASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00346Q8IVM7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 AL512408.1-201ENST00000569378 2000 ntBASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00346Q8IVM7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 AC019069.1-201ENST00000610008 1333 ntBASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00346Q8IVM7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms