Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RGPD4Q7Z3J3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.33■■□□□ 1.8
RGPD4Q7Z3J3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RGPD4Q7Z3J3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RGPD4Q7Z3J3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RGPD4Q7Z3J3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC26.33■■□□□ 1.8
RGPD4Q7Z3J3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC26.33■■□□□ 1.8
RGPD4Q7Z3J3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RGPD4Q7Z3J3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
RGPD4Q7Z3J3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RGPD4Q7Z3J3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 AC068473.5-201ENST00000616428 2072 ntBASIC26.31■■□□□ 1.8
RGPD4Q7Z3J3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 NIFKP9-201ENST00000419265 221 ntBASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 AC010203.1-204ENST00000548782 407 ntBASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 DUSP5P1-201ENST00000441325 1139 ntBASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.3■■□□□ 1.8
RGPD4Q7Z3J3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RGPD4Q7Z3J3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RGPD4Q7Z3J3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RGPD4Q7Z3J3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RGPD4Q7Z3J3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
RGPD4Q7Z3J3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.29■■□□□ 1.8
RGPD4Q7Z3J3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC26.29■■□□□ 1.8
RGPD4Q7Z3J3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RGPD4Q7Z3J3 AC027702.1-201ENST00000563810 1770 ntBASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RGPD4Q7Z3J3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 KRT16P1-201ENST00000399124 1418 ntBASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 C2orf69P3-201ENST00000565542 1120 ntBASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RGPD4Q7Z3J3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
RGPD4Q7Z3J3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.26■■□□□ 1.79
RGPD4Q7Z3J3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RGPD4Q7Z3J3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RGPD4Q7Z3J3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC26.26■■□□□ 1.79
RGPD4Q7Z3J3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC26.26■■□□□ 1.79
RGPD4Q7Z3J3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC26.26■■□□□ 1.79
RGPD4Q7Z3J3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms