Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
REEP3Q6NUK4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
REEP3Q6NUK4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 AC123595.1-201ENST00000440769 1046 ntBASIC19.06■□□□□ 0.64
REEP3Q6NUK4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.06■□□□□ 0.64
REEP3Q6NUK4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.06■□□□□ 0.64
REEP3Q6NUK4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 MIR2861-201ENST00000636310 90 ntBASIC19.05■□□□□ 0.64
REEP3Q6NUK4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.05■□□□□ 0.64
REEP3Q6NUK4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 AC112907.3-201ENST00000577781 2400 ntBASIC19.04■□□□□ 0.64
REEP3Q6NUK4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 KRT18P20-201ENST00000548986 1279 ntBASIC19.04■□□□□ 0.64
REEP3Q6NUK4 CCDC92B-201ENST00000575506 885 ntBASIC19.04■□□□□ 0.64
REEP3Q6NUK4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
REEP3Q6NUK4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
REEP3Q6NUK4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 TERF1P2-201ENST00000583350 1212 ntBASIC19.02■□□□□ 0.64
REEP3Q6NUK4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
REEP3Q6NUK4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.02■□□□□ 0.63
REEP3Q6NUK4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
REEP3Q6NUK4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms