Protein–RNA interactions for Protein: Q5VT52

RPRD2, Regulation of nuclear pre-mRNA domain-containing protein 2, humanhuman

Known RBP Predictions only

Length 1,461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2Q5VT52 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RPRD2Q5VT52 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC30.18■■■□□ 2.42
RPRD2Q5VT52 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RPRD2Q5VT52 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RPRD2Q5VT52 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RPRD2Q5VT52 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
RPRD2Q5VT52 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC30.17■■■□□ 2.42
RPRD2Q5VT52 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RPRD2Q5VT52 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
RPRD2Q5VT52 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RPRD2Q5VT52 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RPRD2Q5VT52 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
RPRD2Q5VT52 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 DYM-203ENST00000442713 2147 ntTSL 2 BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 PARN-205ENST00000539279 1557 ntTSL 2 BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC30.16■■■□□ 2.42
RPRD2Q5VT52 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC30.15■■■□□ 2.42
RPRD2Q5VT52 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RPRD2Q5VT52 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RPRD2Q5VT52 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RPRD2Q5VT52 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC30.14■■■□□ 2.42
RPRD2Q5VT52 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RPRD2Q5VT52 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC30.14■■■□□ 2.42
RPRD2Q5VT52 Z99916.2-201ENST00000604037 246 ntBASIC30.14■■■□□ 2.42
RPRD2Q5VT52 AC073912.3-201ENST00000624414 853 ntBASIC30.14■■■□□ 2.42
RPRD2Q5VT52 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RPRD2Q5VT52 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
RPRD2Q5VT52 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC30.13■■■□□ 2.41
RPRD2Q5VT52 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RPRD2Q5VT52 SERF2-207ENST00000409614 582 ntTSL 2 BASIC30.13■■■□□ 2.41
RPRD2Q5VT52 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC30.13■■■□□ 2.41
RPRD2Q5VT52 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC30.13■■■□□ 2.41
RPRD2Q5VT52 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RPRD2Q5VT52 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC30.13■■■□□ 2.41
RPRD2Q5VT52 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC30.13■■■□□ 2.41
RPRD2Q5VT52 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 ISG20-202ENST00000379224 540 ntTSL 3 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 AC133681.1-201ENST00000465482 601 ntBASIC30.12■■■□□ 2.41
RPRD2Q5VT52 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC30.12■■■□□ 2.41
RPRD2Q5VT52 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 C2orf69P4-201ENST00000565394 541 ntBASIC30.12■■■□□ 2.41
RPRD2Q5VT52 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
RPRD2Q5VT52 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RPRD2Q5VT52 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
RPRD2Q5VT52 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
RPRD2Q5VT52 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
RPRD2Q5VT52 SNORA78-201ENST00000459373 127 ntBASIC30.11■■■□□ 2.41
RPRD2Q5VT52 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
RPRD2Q5VT52 MTDHP1-201ENST00000605323 784 ntBASIC30.11■■■□□ 2.41
RPRD2Q5VT52 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC30.11■■■□□ 2.41
RPRD2Q5VT52 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 EXOC3-AS1-202ENST00000623673 1663 ntBASIC30.1■■■□□ 2.41
RPRD2Q5VT52 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 AC233702.5-201ENST00000584107 538 ntBASIC30.1■■■□□ 2.41
RPRD2Q5VT52 SPIB-206ENST00000596074 847 ntTSL 2 BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RPRD2Q5VT52 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RPRD2Q5VT52 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms