Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
COL13A1Q5TAT6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 FAM220CP-201ENST00000395253 831 ntBASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 CYP21A1P-202ENST00000354927 1481 ntBASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
COL13A1Q5TAT6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
COL13A1Q5TAT6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL13A1Q5TAT6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
COL13A1Q5TAT6 ATP5G2P1-201ENST00000433580 426 ntBASIC23.39■■□□□ 1.33
COL13A1Q5TAT6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.39■■□□□ 1.33
COL13A1Q5TAT6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.39■■□□□ 1.33
COL13A1Q5TAT6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
COL13A1Q5TAT6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
COL13A1Q5TAT6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 COX11P1-201ENST00000489116 835 ntBASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 AC130371.2-201ENST00000619443 611 ntBASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL13A1Q5TAT6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 HLA-G-203ENST00000376818 1127 ntBASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 AC011558.1-201ENST00000623459 338 ntBASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.37■■□□□ 1.33
COL13A1Q5TAT6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 AC004951.3-201ENST00000418645 1148 ntBASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL13A1Q5TAT6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 MIR3652-201ENST00000579335 131 ntBASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
COL13A1Q5TAT6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 AC244107.1-201ENST00000442033 332 ntBASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL13A1Q5TAT6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 HMGA1P5-201ENST00000412453 271 ntBASIC23.33■■□□□ 1.33
COL13A1Q5TAT6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms