Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 AC068338.2-201ENST00000563278 1430 ntBASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 FAM21FP-204ENST00000608637 956 ntBASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.15■■□□□ 1.14
CBWD3Q5JTY5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CBWD3Q5JTY5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.14■■□□□ 1.13
CBWD3Q5JTY5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 AC004911.1-201ENST00000416316 871 ntBASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 AL162412.1-201ENST00000567129 965 ntBASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CBWD3Q5JTY5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CBWD3Q5JTY5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 AL512408.1-201ENST00000569378 2000 ntBASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CBWD3Q5JTY5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.1■■□□□ 1.13
CBWD3Q5JTY5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms