Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP13A4Q4VNC1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ATP13A4Q4VNC1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP13A4Q4VNC1 AL162377.1-201ENST00000618844 1793 ntBASIC21.35■■□□□ 1.01
ATP13A4Q4VNC1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.35■■□□□ 1.01
ATP13A4Q4VNC1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
ATP13A4Q4VNC1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
ATP13A4Q4VNC1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP13A4Q4VNC1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 MIR2861-201ENST00000636310 90 ntBASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP13A4Q4VNC1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 RARRES2P6-201ENST00000567333 442 ntBASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
ATP13A4Q4VNC1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP13A4Q4VNC1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.33■■□□□ 1
ATP13A4Q4VNC1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP13A4Q4VNC1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
ATP13A4Q4VNC1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A4Q4VNC1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 AC007322.3-201ENST00000426526 701 ntBASIC21.3■■□□□ 1
ATP13A4Q4VNC1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP13A4Q4VNC1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms