Protein–RNA interactions for Protein: Q06623

HDA3, HDA1 complex subunit 3, yeastyeast

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA3Q06623 CDC24YAL041W 2565 nt4.02□□□□□ -1.77
HDA3Q06623 LCL2YLR104W 396 nt4.02□□□□□ -1.77
HDA3Q06623 YLR140WYLR140W 327 nt4.02□□□□□ -1.77
HDA3Q06623 PIM1YBL022C 3402 nt4.02□□□□□ -1.77
HDA3Q06623 RPO31YOR116C 4383 nt4.02□□□□□ -1.77
HDA3Q06623 YNR065CYNR065C 3351 nt4.01□□□□□ -1.77
HDA3Q06623 SOK2YMR016C 2358 nt4.01□□□□□ -1.77
HDA3Q06623 YNL034WYNL034W 1839 nt4.01□□□□□ -1.77
HDA3Q06623 GYP7YDL234C 2241 nt4.01□□□□□ -1.77
HDA3Q06623 CPA2YJR109C 3357 nt4□□□□□ -1.77
HDA3Q06623 LEU3YLR451W 2661 nt4□□□□□ -1.77
HDA3Q06623 DIP2YLR129W 2832 nt4□□□□□ -1.77
HDA3Q06623 ATP25YMR098C 1839 nt4□□□□□ -1.77
HDA3Q06623 SRP72YPL210C 1923 nt4□□□□□ -1.77
HDA3Q06623 snR79snR79 84 nt4□□□□□ -1.77
HDA3Q06623 YER189WYER189W 369 nt4□□□□□ -1.77
HDA3Q06623 YGL239CYGL239C 315 nt4□□□□□ -1.77
HDA3Q06623 CHS3YBR023C 3498 nt3.99□□□□□ -1.77
HDA3Q06623 RPS7AYOR096W 573 nt3.99□□□□□ -1.77
HDA3Q06623 RPS23BYPR132W 438 nt3.99□□□□□ -1.77
HDA3Q06623 VPS64YDR200C 1815 nt3.99□□□□□ -1.77
HDA3Q06623 PWP2YCR057C 2772 nt3.99□□□□□ -1.77
HDA3Q06623 ECM5YMR176W 4236 nt3.99□□□□□ -1.77
HDA3Q06623 NCR1YPL006W 3513 nt3.99□□□□□ -1.77
HDA3Q06623 BIT61YJL058C 1632 nt3.99□□□□□ -1.77
HDA3Q06623 BRO1YPL084W 2535 nt3.98□□□□□ -1.77
HDA3Q06623 APL4YPR029C 2499 nt3.98□□□□□ -1.77
HDA3Q06623 RPL36AYMR194W 303 nt3.98□□□□□ -1.77
HDA3Q06623 RSM19YNR037C 276 nt3.98□□□□□ -1.77
HDA3Q06623 snR191snR191 274 nt3.98□□□□□ -1.77
HDA3Q06623 SIP3YNL257C 3690 nt3.97□□□□□ -1.77
HDA3Q06623 HHT1YBR010W 411 nt3.97□□□□□ -1.77
HDA3Q06623 YPR063CYPR063C 423 nt3.97□□□□□ -1.77
HDA3Q06623 YJL181WYJL181W 1836 nt3.97□□□□□ -1.77
HDA3Q06623 HMG1YML075C 3165 nt3.97□□□□□ -1.77
HDA3Q06623 NPR1YNL183C 2373 nt3.97□□□□□ -1.77
HDA3Q06623 YIL166CYIL166C 1629 nt3.96□□□□□ -1.78
HDA3Q06623 YCG1YDR325W 3108 nt3.96□□□□□ -1.78
HDA3Q06623 VMA1YDL185W 3216 nt3.96□□□□□ -1.78
HDA3Q06623 tF(GAA)QtF(GAA)Q 75 nt3.96□□□□□ -1.78
HDA3Q06623 TRM7YBR061C 933 nt3.96□□□□□ -1.78
HDA3Q06623 TCO89YPL180W 2400 nt3.96□□□□□ -1.78
HDA3Q06623 TCP1YDR212W 1680 nt3.96□□□□□ -1.78
HDA3Q06623 RPO21YDL140C 5202 nt3.96□□□□□ -1.78
HDA3Q06623 RSC1YGR056W 2787 nt3.96□□□□□ -1.78
HDA3Q06623 YRM1YOR172W 2361 nt3.95□□□□□ -1.78
HDA3Q06623 OLI1Q0130 231 nt3.95□□□□□ -1.78
HDA3Q06623 YHL041WYHL041W 450 nt3.95□□□□□ -1.78
HDA3Q06623 YBL083CYBL083C 426 nt3.95□□□□□ -1.78
HDA3Q06623 YPR014CYPR014C 330 nt3.95□□□□□ -1.78
HDA3Q06623 YPR146CYPR146C 330 nt3.95□□□□□ -1.78
HDA3Q06623 TFB1YDR311W 1929 nt3.95□□□□□ -1.78
HDA3Q06623 LOS1YKL205W 3303 nt3.94□□□□□ -1.78
HDA3Q06623 SPT10YJL127C 1923 nt3.94□□□□□ -1.78
HDA3Q06623 snR60snR60 104 nt3.94□□□□□ -1.78
HDA3Q06623 YER121WYER121W 345 nt3.94□□□□□ -1.78
HDA3Q06623 YML116W-AYML116W-A 303 nt3.94□□□□□ -1.78
HDA3Q06623 CCM1YGR150C 2595 nt3.94□□□□□ -1.78
HDA3Q06623 ETP1YHL010C 1758 nt3.94□□□□□ -1.78
HDA3Q06623 MTR10YOR160W 2919 nt3.94□□□□□ -1.78
HDA3Q06623 PHO81YGR233C 3537 nt3.94□□□□□ -1.78
HDA3Q06623 ECM22YLR228C 2445 nt3.93□□□□□ -1.78
HDA3Q06623 RPS23AYGR118W 438 nt3.93□□□□□ -1.78
HDA3Q06623 SOD1YJR104C 465 nt3.93□□□□□ -1.78
HDA3Q06623 GAL11YOL051W 3246 nt3.93□□□□□ -1.78
HDA3Q06623 TAF7YMR227C 1773 nt3.93□□□□□ -1.78
HDA3Q06623 GPI13YLL031C 3054 nt3.93□□□□□ -1.78
HDA3Q06623 KIN2YLR096W 3444 nt3.92□□□□□ -1.78
HDA3Q06623 SAR1YPL218W 573 nt3.92□□□□□ -1.78
HDA3Q06623 KIP3YGL216W 2418 nt3.92□□□□□ -1.78
HDA3Q06623 DOA4YDR069C 2781 nt3.91□□□□□ -1.78
HDA3Q06623 BNI4YNL233W 2679 nt3.91□□□□□ -1.78
HDA3Q06623 ZDS1YMR273C 2748 nt3.91□□□□□ -1.78
HDA3Q06623 RPS17BYDR447C 411 nt3.91□□□□□ -1.78
HDA3Q06623 COX23YHR116W 456 nt3.91□□□□□ -1.78
HDA3Q06623 YJL222W-BYJL222W-B 138 nt3.91□□□□□ -1.78
HDA3Q06623 RPS27AYKL156W 249 nt3.91□□□□□ -1.78
HDA3Q06623 COF1YLL050C 432 nt3.91□□□□□ -1.78
HDA3Q06623 SRO7YPR032W 3102 nt3.9□□□□□ -1.78
HDA3Q06623 TOP1YOL006C 2310 nt3.9□□□□□ -1.78
HDA3Q06623 NPC2YDL046W 522 nt3.9□□□□□ -1.79
HDA3Q06623 TMA17YDL110C 453 nt3.9□□□□□ -1.79
HDA3Q06623 YNL028WYNL028W 318 nt3.9□□□□□ -1.79
HDA3Q06623 YBR141W-AYBR141W-A 96 nt3.9□□□□□ -1.79
HDA3Q06623 ATG2YNL242W 4779 nt3.9□□□□□ -1.79
HDA3Q06623 MTC4YBR255W 2085 nt3.9□□□□□ -1.79
HDA3Q06623 DIS3YOL021C 3006 nt3.89□□□□□ -1.79
HDA3Q06623 APC11YDL008W 498 nt3.89□□□□□ -1.79
HDA3Q06623 YEL032C-AYEL032C-A 162 nt3.89□□□□□ -1.79
HDA3Q06623 YLR154W-BYLR154W-B 165 nt3.89□□□□□ -1.79
HDA3Q06623 NSP1YJL041W 2472 nt3.89□□□□□ -1.79
HDA3Q06623 YGR250CYGR250C 2346 nt3.89□□□□□ -1.79
HDA3Q06623 VTC4YJL012C 2166 nt3.89□□□□□ -1.79
HDA3Q06623 IGO2YHR132W-A 396 nt3.88□□□□□ -1.79
HDA3Q06623 YIL059CYIL059C 366 nt3.88□□□□□ -1.79
HDA3Q06623 TIM12YBR091C 330 nt3.88□□□□□ -1.79
HDA3Q06623 TMA108YIL137C 2841 nt3.88□□□□□ -1.79
HDA3Q06623 GCD6YDR211W 2139 nt3.88□□□□□ -1.79
HDA3Q06623 TRK1YJL129C 3708 nt3.87□□□□□ -1.79
HDA3Q06623 SPT23YKL020C 3249 nt3.87□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms