Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.31■□□□□ 0.52
H3F3AP84243 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
H3F3AP84243 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
H3F3AP84243 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.31■□□□□ 0.52
H3F3AP84243 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.3■□□□□ 0.52
H3F3AP84243 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.3■□□□□ 0.52
H3F3AP84243 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.3■□□□□ 0.52
H3F3AP84243 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 NCF1B-203ENST00000435988 1254 ntBASIC18.3■□□□□ 0.52
H3F3AP84243 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.3■□□□□ 0.52
H3F3AP84243 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
H3F3AP84243 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 AC010980.2-201ENST00000587099 1412 ntBASIC18.3■□□□□ 0.52
H3F3AP84243 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.3■□□□□ 0.52
H3F3AP84243 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H3F3AP84243 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
H3F3AP84243 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3AP84243 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
H3F3AP84243 MCRIP2P1-201ENST00000394346 511 ntBASIC18.29■□□□□ 0.52
H3F3AP84243 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.29■□□□□ 0.52
H3F3AP84243 AC006970.2-201ENST00000450065 779 ntBASIC18.29■□□□□ 0.52
H3F3AP84243 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3AP84243 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.29■□□□□ 0.52
H3F3AP84243 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3AP84243 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
H3F3AP84243 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
H3F3AP84243 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
H3F3AP84243 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3AP84243 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3AP84243 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.29■□□□□ 0.52
H3F3AP84243 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3AP84243 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
H3F3AP84243 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H3F3AP84243 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H3F3AP84243 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
H3F3AP84243 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
H3F3AP84243 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H3F3AP84243 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.28■□□□□ 0.52
H3F3AP84243 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3AP84243 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3AP84243 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3AP84243 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.28■□□□□ 0.52
H3F3AP84243 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3AP84243 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.28■□□□□ 0.52
H3F3AP84243 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.28■□□□□ 0.52
H3F3AP84243 AC093787.1-201ENST00000450396 207 ntBASIC18.28■□□□□ 0.52
H3F3AP84243 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3AP84243 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.28■□□□□ 0.52
H3F3AP84243 AF201337.1-201ENST00000520239 748 ntBASIC18.28■□□□□ 0.52
H3F3AP84243 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.28■□□□□ 0.52
H3F3AP84243 AC087633.2-202ENST00000565166 1439 ntBASIC18.28■□□□□ 0.52
H3F3AP84243 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H3F3AP84243 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
H3F3AP84243 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3F3AP84243 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.27■□□□□ 0.52
H3F3AP84243 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3F3AP84243 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
H3F3AP84243 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
H3F3AP84243 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.27■□□□□ 0.52
H3F3AP84243 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3F3AP84243 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
H3F3AP84243 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.27■□□□□ 0.52
H3F3AP84243 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3F3AP84243 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3F3AP84243 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.27■□□□□ 0.52
H3F3AP84243 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
H3F3AP84243 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3F3AP84243 AC083906.2-201ENST00000511578 360 ntBASIC18.27■□□□□ 0.52
H3F3AP84243 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.27■□□□□ 0.52
H3F3AP84243 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.27■□□□□ 0.52
H3F3AP84243 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.27■□□□□ 0.52
H3F3AP84243 AL121832.2-201ENST00000610979 668 ntBASIC18.27■□□□□ 0.52
H3F3AP84243 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.27■□□□□ 0.52
H3F3AP84243 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.27■□□□□ 0.52
H3F3AP84243 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
H3F3AP84243 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
H3F3AP84243 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
H3F3AP84243 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
H3F3AP84243 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
H3F3AP84243 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.26■□□□□ 0.51
H3F3AP84243 FP700111.2-201ENST00000619190 1892 ntBASIC18.26■□□□□ 0.51
H3F3AP84243 AL121603.2-201ENST00000557373 2117 ntBASIC18.26■□□□□ 0.51
H3F3AP84243 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H3F3AP84243 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
H3F3AP84243 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H3F3AP84243 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.26■□□□□ 0.51
H3F3AP84243 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
H3F3AP84243 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms