Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CCL20P78556 Z92544.1-202ENST00000571933 1220 ntBASIC16.13■□□□□ 0.17
CCL20P78556 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.13■□□□□ 0.17
CCL20P78556 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL20P78556 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL20P78556 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL20P78556 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL20P78556 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CCL20P78556 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.13■□□□□ 0.17
CCL20P78556 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCL20P78556 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL20P78556 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL20P78556 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL20P78556 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.12■□□□□ 0.17
CCL20P78556 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL20P78556 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.12■□□□□ 0.17
CCL20P78556 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CCL20P78556 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCL20P78556 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 AC133637.1-201ENST00000624115 1537 ntBASIC16.12■□□□□ 0.17
CCL20P78556 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
CCL20P78556 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.12■□□□□ 0.17
CCL20P78556 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCL20P78556 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCL20P78556 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL20P78556 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL20P78556 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL20P78556 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL20P78556 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL20P78556 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.11■□□□□ 0.17
CCL20P78556 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.11■□□□□ 0.17
CCL20P78556 AC068587.7-201ENST00000641602 218 ntBASIC16.11■□□□□ 0.17
CCL20P78556 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
CCL20P78556 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL20P78556 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL20P78556 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL20P78556 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 AC092720.2-201ENST00000602388 1665 ntBASIC16.11■□□□□ 0.17
CCL20P78556 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCL20P78556 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL20P78556 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
CCL20P78556 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCL20P78556 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCL20P78556 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL20P78556 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCL20P78556 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCL20P78556 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL20P78556 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL20P78556 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCL20P78556 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCL20P78556 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL20P78556 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCL20P78556 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCL20P78556 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCL20P78556 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL20P78556 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL20P78556 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL20P78556 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL20P78556 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL20P78556 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL20P78556 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCL20P78556 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL20P78556 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL20P78556 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL20P78556 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL20P78556 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL20P78556 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCL20P78556 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL20P78556 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms