Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.18■□□□□ 0.98
IRX4P78413 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.18■□□□□ 0.98
IRX4P78413 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
IRX4P78413 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IRX4P78413 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
IRX4P78413 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IRX4P78413 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.17■□□□□ 0.98
IRX4P78413 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
IRX4P78413 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IRX4P78413 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IRX4P78413 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.17■□□□□ 0.98
IRX4P78413 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.17■□□□□ 0.98
IRX4P78413 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.17■□□□□ 0.98
IRX4P78413 TERF1P5-201ENST00000477545 1207 ntBASIC21.17■□□□□ 0.98
IRX4P78413 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.17■□□□□ 0.98
IRX4P78413 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.17■□□□□ 0.98
IRX4P78413 SLC7A5P1-201ENST00000568957 537 ntBASIC21.17■□□□□ 0.98
IRX4P78413 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
IRX4P78413 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IRX4P78413 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IRX4P78413 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
IRX4P78413 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.16■□□□□ 0.98
IRX4P78413 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.16■□□□□ 0.98
IRX4P78413 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
IRX4P78413 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.16■□□□□ 0.98
IRX4P78413 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.16■□□□□ 0.98
IRX4P78413 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IRX4P78413 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.15■□□□□ 0.98
IRX4P78413 DUSP5P2-201ENST00000426873 1033 ntBASIC21.15■□□□□ 0.98
IRX4P78413 CYP2T1P-201ENST00000432607 1285 ntBASIC21.15■□□□□ 0.98
IRX4P78413 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.15■□□□□ 0.98
IRX4P78413 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.15■□□□□ 0.98
IRX4P78413 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
IRX4P78413 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.15■□□□□ 0.98
IRX4P78413 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IRX4P78413 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
IRX4P78413 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.14■□□□□ 0.98
IRX4P78413 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.14■□□□□ 0.98
IRX4P78413 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
IRX4P78413 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IRX4P78413 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IRX4P78413 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.14■□□□□ 0.97
IRX4P78413 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IRX4P78413 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IRX4P78413 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IRX4P78413 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.14■□□□□ 0.97
IRX4P78413 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.14■□□□□ 0.97
IRX4P78413 AP006294.2-201ENST00000641667 209 ntBASIC21.14■□□□□ 0.97
IRX4P78413 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IRX4P78413 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IRX4P78413 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
IRX4P78413 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.14■□□□□ 0.97
IRX4P78413 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
IRX4P78413 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.13■□□□□ 0.97
IRX4P78413 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IRX4P78413 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
IRX4P78413 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.13■□□□□ 0.97
IRX4P78413 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.13■□□□□ 0.97
IRX4P78413 AC098590.1-201ENST00000468126 897 ntBASIC21.13■□□□□ 0.97
IRX4P78413 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.13■□□□□ 0.97
IRX4P78413 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IRX4P78413 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.13■□□□□ 0.97
IRX4P78413 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX4P78413 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IRX4P78413 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
IRX4P78413 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IRX4P78413 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
IRX4P78413 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IRX4P78413 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms