Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA52P62987 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA52P62987 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBA52P62987 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.56■□□□□ 0.4
UBA52P62987 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.56■□□□□ 0.4
UBA52P62987 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.56■□□□□ 0.4
UBA52P62987 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.56■□□□□ 0.4
UBA52P62987 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBA52P62987 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA52P62987 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA52P62987 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBA52P62987 BX005040.4-201ENST00000637145 1518 ntBASIC17.56■□□□□ 0.4
UBA52P62987 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBA52P62987 BX323043.1-201ENST00000641006 1765 ntBASIC17.56■□□□□ 0.4
UBA52P62987 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA52P62987 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.55■□□□□ 0.4
UBA52P62987 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
UBA52P62987 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
UBA52P62987 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA52P62987 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA52P62987 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.55■□□□□ 0.4
UBA52P62987 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.55■□□□□ 0.4
UBA52P62987 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBA52P62987 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.55■□□□□ 0.4
UBA52P62987 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBA52P62987 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBA52P62987 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.55■□□□□ 0.4
UBA52P62987 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UBA52P62987 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.54■□□□□ 0.4
UBA52P62987 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
UBA52P62987 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.54■□□□□ 0.4
UBA52P62987 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBA52P62987 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.54■□□□□ 0.4
UBA52P62987 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA52P62987 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.54■□□□□ 0.4
UBA52P62987 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA52P62987 KRT19P1-201ENST00000405746 1186 ntBASIC17.54■□□□□ 0.4
UBA52P62987 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 AC006970.2-201ENST00000450065 779 ntBASIC17.54■□□□□ 0.4
UBA52P62987 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.54■□□□□ 0.4
UBA52P62987 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA52P62987 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA52P62987 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.54■□□□□ 0.4
UBA52P62987 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.54■□□□□ 0.4
UBA52P62987 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 AC068587.7-201ENST00000641602 218 ntBASIC17.54■□□□□ 0.4
UBA52P62987 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
UBA52P62987 AC018445.3-201ENST00000624177 1945 ntBASIC17.54■□□□□ 0.4
UBA52P62987 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
UBA52P62987 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBA52P62987 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
UBA52P62987 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
UBA52P62987 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA52P62987 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
UBA52P62987 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.53■□□□□ 0.4
UBA52P62987 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA52P62987 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.53■□□□□ 0.4
UBA52P62987 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.53■□□□□ 0.4
UBA52P62987 AC104771.1-201ENST00000603335 964 ntBASIC17.53■□□□□ 0.4
UBA52P62987 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.53■□□□□ 0.4
UBA52P62987 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
UBA52P62987 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.53■□□□□ 0.4
UBA52P62987 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
UBA52P62987 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms