Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LSM6P62312 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.97■□□□□ 0.47
LSM6P62312 AC016769.1-201ENST00000409132 1010 ntBASIC17.97■□□□□ 0.47
LSM6P62312 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.97■□□□□ 0.47
LSM6P62312 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LSM6P62312 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LSM6P62312 AC013268.1-206ENST00000638368 961 ntBASIC17.97■□□□□ 0.47
LSM6P62312 AC112229.1-201ENST00000639295 961 ntBASIC17.97■□□□□ 0.47
LSM6P62312 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM6P62312 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LSM6P62312 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM6P62312 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.97■□□□□ 0.47
LSM6P62312 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSM6P62312 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM6P62312 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
LSM6P62312 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM6P62312 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.97■□□□□ 0.47
LSM6P62312 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM6P62312 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM6P62312 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM6P62312 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM6P62312 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.96■□□□□ 0.47
LSM6P62312 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LSM6P62312 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM6P62312 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM6P62312 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.96■□□□□ 0.47
LSM6P62312 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.96■□□□□ 0.47
LSM6P62312 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
LSM6P62312 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.96■□□□□ 0.47
LSM6P62312 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM6P62312 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.96■□□□□ 0.47
LSM6P62312 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM6P62312 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.96■□□□□ 0.46
LSM6P62312 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 AC092667.1-201ENST00000434301 2586 ntBASIC17.95■□□□□ 0.46
LSM6P62312 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LSM6P62312 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.95■□□□□ 0.46
LSM6P62312 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LSM6P62312 AC006015.1-201ENST00000429970 570 ntBASIC17.95■□□□□ 0.46
LSM6P62312 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM6P62312 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.95■□□□□ 0.46
LSM6P62312 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LSM6P62312 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM6P62312 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LSM6P62312 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LSM6P62312 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LSM6P62312 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
LSM6P62312 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM6P62312 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LSM6P62312 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
LSM6P62312 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LSM6P62312 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.94■□□□□ 0.46
LSM6P62312 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.94■□□□□ 0.46
LSM6P62312 MFSD11-216ENST00000590393 1141 ntBASIC17.94■□□□□ 0.46
LSM6P62312 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.94■□□□□ 0.46
LSM6P62312 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.94■□□□□ 0.46
LSM6P62312 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LSM6P62312 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
LSM6P62312 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.94■□□□□ 0.46
LSM6P62312 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.94■□□□□ 0.46
LSM6P62312 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LSM6P62312 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LSM6P62312 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.94■□□□□ 0.46
LSM6P62312 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.94■□□□□ 0.46
LSM6P62312 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.94■□□□□ 0.46
LSM6P62312 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.94■□□□□ 0.46
LSM6P62312 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM6P62312 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 KRT8P36-201ENST00000489121 1440 ntBASIC17.93■□□□□ 0.46
LSM6P62312 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.93■□□□□ 0.46
LSM6P62312 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM6P62312 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.93■□□□□ 0.46
LSM6P62312 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms