Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM258P61165 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM258P61165 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM258P61165 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
TMEM258P61165 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM258P61165 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM258P61165 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM258P61165 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM258P61165 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM258P61165 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM258P61165 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM258P61165 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM258P61165 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM258P61165 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM258P61165 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM258P61165 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM258P61165 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC12.33□□□□□ -0.43
TMEM258P61165 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM258P61165 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM258P61165 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM258P61165 FLJ16779-201ENST00000612722 7638 ntBASIC12.33□□□□□ -0.44
TMEM258P61165 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 TUB-203ENST00000534099 1759 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM258P61165 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM258P61165 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM258P61165 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TMEM258P61165 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TMEM258P61165 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM258P61165 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TMEM258P61165 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM258P61165 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM258P61165 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TMEM258P61165 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM258P61165 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM258P61165 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM258P61165 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM258P61165 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
TMEM258P61165 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TMEM258P61165 AC009053.2-201ENST00000563701 2365 ntBASIC12.32□□□□□ -0.44
TMEM258P61165 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM258P61165 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TMEM258P61165 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM258P61165 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM258P61165 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM258P61165 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM258P61165 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TMEM258P61165 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
TMEM258P61165 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TMEM258P61165 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM258P61165 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM258P61165 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TMEM258P61165 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.31□□□□□ -0.44
TMEM258P61165 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
TMEM258P61165 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TMEM258P61165 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TMEM258P61165 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.31□□□□□ -0.44
TMEM258P61165 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM258P61165 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms