Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D3P61077 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D3P61077 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D3P61077 AC073314.1-201ENST00000568729 2216 ntBASIC14.53□□□□□ -0.08
UBE2D3P61077 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D3P61077 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D3P61077 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D3P61077 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D3P61077 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.53□□□□□ -0.08
UBE2D3P61077 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
UBE2D3P61077 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.53□□□□□ -0.08
UBE2D3P61077 AC011484.1-201ENST00000377652 1995 ntBASIC14.53□□□□□ -0.08
UBE2D3P61077 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D3P61077 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBE2D3P61077 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D3P61077 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D3P61077 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.52□□□□□ -0.08
UBE2D3P61077 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D3P61077 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
UBE2D3P61077 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D3P61077 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.52□□□□□ -0.08
UBE2D3P61077 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBE2D3P61077 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D3P61077 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D3P61077 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.52□□□□□ -0.09
UBE2D3P61077 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D3P61077 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D3P61077 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D3P61077 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D3P61077 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D3P61077 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBE2D3P61077 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
UBE2D3P61077 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
UBE2D3P61077 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UBE2D3P61077 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.51□□□□□ -0.09
UBE2D3P61077 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.51□□□□□ -0.09
UBE2D3P61077 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
UBE2D3P61077 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.51□□□□□ -0.09
UBE2D3P61077 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.51□□□□□ -0.09
UBE2D3P61077 IRS3P-201ENST00000223076 1006 ntBASIC14.51□□□□□ -0.09
UBE2D3P61077 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.51□□□□□ -0.09
UBE2D3P61077 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.51□□□□□ -0.09
UBE2D3P61077 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.51□□□□□ -0.09
UBE2D3P61077 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.51□□□□□ -0.09
UBE2D3P61077 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.51□□□□□ -0.09
UBE2D3P61077 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.51□□□□□ -0.09
UBE2D3P61077 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
UBE2D3P61077 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBE2D3P61077 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
UBE2D3P61077 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
UBE2D3P61077 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
UBE2D3P61077 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
UBE2D3P61077 BX323043.1-201ENST00000641006 1765 ntBASIC14.5□□□□□ -0.09
UBE2D3P61077 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D3P61077 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.5□□□□□ -0.09
UBE2D3P61077 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.5□□□□□ -0.09
UBE2D3P61077 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.5□□□□□ -0.09
UBE2D3P61077 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D3P61077 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.5□□□□□ -0.09
UBE2D3P61077 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D3P61077 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
UBE2D3P61077 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.5□□□□□ -0.09
UBE2D3P61077 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.5□□□□□ -0.09
UBE2D3P61077 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D3P61077 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D3P61077 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.5□□□□□ -0.09
UBE2D3P61077 AC018445.3-201ENST00000624177 1945 ntBASIC14.5□□□□□ -0.09
UBE2D3P61077 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.5□□□□□ -0.09
UBE2D3P61077 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D3P61077 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UBE2D3P61077 AC027702.1-201ENST00000563810 1770 ntBASIC14.5□□□□□ -0.09
UBE2D3P61077 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D3P61077 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
UBE2D3P61077 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.49□□□□□ -0.09
UBE2D3P61077 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D3P61077 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
UBE2D3P61077 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.49□□□□□ -0.09
UBE2D3P61077 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.49□□□□□ -0.09
UBE2D3P61077 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D3P61077 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D3P61077 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D3P61077 AC027612.3-201ENST00000413684 1047 ntBASIC14.49□□□□□ -0.09
UBE2D3P61077 AC105265.2-201ENST00000467189 838 ntBASIC14.49□□□□□ -0.09
UBE2D3P61077 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.49□□□□□ -0.09
UBE2D3P61077 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UBE2D3P61077 AC138907.5-202ENST00000569484 235 ntBASIC14.49□□□□□ -0.09
UBE2D3P61077 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.49□□□□□ -0.09
UBE2D3P61077 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms