Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.88■■□□□ 1.09
VCPP55072 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCPP55072 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
VCPP55072 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCPP55072 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.87■■□□□ 1.09
VCPP55072 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.87■■□□□ 1.09
VCPP55072 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.87■■□□□ 1.09
VCPP55072 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 AL359736.2-201ENST00000621992 437 ntBASIC21.87■■□□□ 1.09
VCPP55072 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
VCPP55072 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.87■■□□□ 1.09
VCPP55072 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCPP55072 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.87■■□□□ 1.09
VCPP55072 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
VCPP55072 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCPP55072 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VCPP55072 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.86■■□□□ 1.09
VCPP55072 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VCPP55072 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
VCPP55072 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCPP55072 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCPP55072 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
VCPP55072 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.86■■□□□ 1.09
VCPP55072 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VCPP55072 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VCPP55072 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VCPP55072 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.86■■□□□ 1.09
VCPP55072 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.86■■□□□ 1.09
VCPP55072 REXO1L12P-201ENST00000622156 912 ntBASIC21.86■■□□□ 1.09
VCPP55072 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
VCPP55072 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCPP55072 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
VCPP55072 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCPP55072 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
VCPP55072 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.85■■□□□ 1.09
VCPP55072 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VCPP55072 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.85■■□□□ 1.09
VCPP55072 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.85■■□□□ 1.09
VCPP55072 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
VCPP55072 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
VCPP55072 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VCPP55072 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.85■■□□□ 1.09
VCPP55072 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.85■■□□□ 1.09
VCPP55072 AC007322.4-201ENST00000509611 723 ntBASIC21.85■■□□□ 1.09
VCPP55072 UNC93B5-201ENST00000530315 699 ntBASIC21.85■■□□□ 1.09
VCPP55072 AC069236.1-201ENST00000604339 616 ntBASIC21.85■■□□□ 1.09
VCPP55072 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.85■■□□□ 1.09
VCPP55072 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.85■■□□□ 1.09
VCPP55072 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VCPP55072 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCPP55072 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.85■■□□□ 1.09
VCPP55072 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.84■■□□□ 1.09
VCPP55072 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.84■■□□□ 1.09
VCPP55072 MIR718-201ENST00000390190 70 ntBASIC21.84■■□□□ 1.09
VCPP55072 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
VCPP55072 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.84■■□□□ 1.09
VCPP55072 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
VCPP55072 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.84■■□□□ 1.09
VCPP55072 AP003097.1-201ENST00000530657 1135 ntBASIC21.84■■□□□ 1.09
VCPP55072 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.84■■□□□ 1.09
VCPP55072 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.84■■□□□ 1.09
VCPP55072 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.84■■□□□ 1.09
VCPP55072 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VCPP55072 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
VCPP55072 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VCPP55072 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VCPP55072 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VCPP55072 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.83■■□□□ 1.09
VCPP55072 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VCPP55072 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VCPP55072 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VCPP55072 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VCPP55072 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
VCPP55072 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.83■■□□□ 1.09
VCPP55072 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.83■■□□□ 1.09
VCPP55072 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.83■■□□□ 1.09
VCPP55072 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VCPP55072 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
VCPP55072 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
VCPP55072 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VCPP55072 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms