Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC4P55056 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
APOC4P55056 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC4P55056 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.01□□□□□ -0.01
APOC4P55056 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC4P55056 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC4P55056 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC4P55056 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC4P55056 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC4P55056 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC4P55056 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.01□□□□□ -0.01
APOC4P55056 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15□□□□□ -0.01
APOC4P55056 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
APOC4P55056 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
APOC4P55056 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
APOC4P55056 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15□□□□□ -0.01
APOC4P55056 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15□□□□□ -0.01
APOC4P55056 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15□□□□□ -0.01
APOC4P55056 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15□□□□□ -0.01
APOC4P55056 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15□□□□□ -0.01
APOC4P55056 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15□□□□□ -0.01
APOC4P55056 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15□□□□□ -0.01
APOC4P55056 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15□□□□□ -0.01
APOC4P55056 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15□□□□□ -0.01
APOC4P55056 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15□□□□□ -0.01
APOC4P55056 TMEM191A-211ENST00000637163 1067 ntBASIC15□□□□□ -0.01
APOC4P55056 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15□□□□□ -0.01
APOC4P55056 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15□□□□□ -0.01
APOC4P55056 AC011484.1-201ENST00000377652 1995 ntBASIC15□□□□□ -0.01
APOC4P55056 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15□□□□□ -0.01
APOC4P55056 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC4P55056 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
APOC4P55056 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
APOC4P55056 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 POU5F1P3-201ENST00000428824 1078 ntBASIC14.99□□□□□ -0.01
APOC4P55056 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.99□□□□□ -0.01
APOC4P55056 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.99□□□□□ -0.01
APOC4P55056 AC060766.5-201ENST00000590539 871 ntBASIC14.99□□□□□ -0.01
APOC4P55056 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 HLA-B-256ENST00000639848 1089 ntBASIC14.99□□□□□ -0.01
APOC4P55056 EP400NL-214ENST00000641289 2402 ntBASIC14.99□□□□□ -0.01
APOC4P55056 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.99□□□□□ -0.01
APOC4P55056 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
APOC4P55056 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.99□□□□□ -0.01
APOC4P55056 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
APOC4P55056 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC4P55056 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
APOC4P55056 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
APOC4P55056 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
APOC4P55056 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC4P55056 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC4P55056 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APOC4P55056 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.98□□□□□ -0.01
APOC4P55056 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.98□□□□□ -0.01
APOC4P55056 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.98□□□□□ -0.01
APOC4P55056 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.98□□□□□ -0.01
APOC4P55056 AL356652.1-201ENST00000615962 565 ntBASIC14.98□□□□□ -0.01
APOC4P55056 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC4P55056 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC4P55056 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.98□□□□□ -0.01
APOC4P55056 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOC4P55056 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.98□□□□□ -0.01
APOC4P55056 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.97□□□□□ -0.01
APOC4P55056 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOC4P55056 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms