Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 ADK1YDR226W 669 nt3.82□□□□□ -1.8
UFD2P54860 DAD4YDR320C-A 219 nt3.82□□□□□ -1.8
UFD2P54860 STE14YDR410C 720 nt3.82□□□□□ -1.8
UFD2P54860 YGL149WYGL149W 306 nt3.82□□□□□ -1.8
UFD2P54860 YLR458WYLR458W 381 nt3.82□□□□□ -1.8
UFD2P54860 HCH1YNL281W 462 nt3.82□□□□□ -1.8
UFD2P54860 ESF2YNR054C 951 nt3.82□□□□□ -1.8
UFD2P54860 SIP3YNL257C 3690 nt3.82□□□□□ -1.8
UFD2P54860 MSH2YOL090W 2895 nt3.81□□□□□ -1.8
UFD2P54860 PRK1YIL095W 2433 nt3.81□□□□□ -1.8
UFD2P54860 ECM5YMR176W 4236 nt3.81□□□□□ -1.8
UFD2P54860 AST2YER101C 1293 nt3.81□□□□□ -1.8
UFD2P54860 tK(UUU)DtK(UUU)D 73 nt3.81□□□□□ -1.8
UFD2P54860 tK(UUU)G1tK(UUU)G1 73 nt3.81□□□□□ -1.8
UFD2P54860 tK(UUU)G2tK(UUU)G2 73 nt3.81□□□□□ -1.8
UFD2P54860 tK(UUU)KtK(UUU)K 73 nt3.81□□□□□ -1.8
UFD2P54860 tK(UUU)LtK(UUU)L 73 nt3.81□□□□□ -1.8
UFD2P54860 tK(UUU)OtK(UUU)O 73 nt3.81□□□□□ -1.8
UFD2P54860 tK(UUU)PtK(UUU)P 73 nt3.81□□□□□ -1.8
UFD2P54860 TAR1YLR154W-C 375 nt3.81□□□□□ -1.8
UFD2P54860 YOR050CYOR050C 348 nt3.81□□□□□ -1.8
UFD2P54860 YPK1YKL126W 2043 nt3.8□□□□□ -1.8
UFD2P54860 NPR1YNL183C 2373 nt3.8□□□□□ -1.8
UFD2P54860 COX23YHR116W 456 nt3.8□□□□□ -1.8
UFD2P54860 YNL198CYNL198C 303 nt3.8□□□□□ -1.8
UFD2P54860 OSW7YFR039C 1533 nt3.8□□□□□ -1.8
UFD2P54860 SPA2YLL021W 4401 nt3.79□□□□□ -1.8
UFD2P54860 APC11YDL008W 498 nt3.79□□□□□ -1.8
UFD2P54860 MZM1YDR493W 372 nt3.79□□□□□ -1.8
UFD2P54860 SOD1YJR104C 465 nt3.79□□□□□ -1.8
UFD2P54860 SWD3YBR175W 948 nt3.79□□□□□ -1.8
UFD2P54860 STU1YBL034C 4542 nt3.79□□□□□ -1.8
UFD2P54860 VPS41YDR080W 2979 nt3.79□□□□□ -1.8
UFD2P54860 MSS11YMR164C 2277 nt3.79□□□□□ -1.8
UFD2P54860 GYP7YDL234C 2241 nt3.78□□□□□ -1.8
UFD2P54860 RPL35AYDL191W 363 nt3.78□□□□□ -1.8
UFD2P54860 YDR406W-AYDR406W-A 246 nt3.78□□□□□ -1.8
UFD2P54860 RPL14BYHL001W 417 nt3.78□□□□□ -1.8
UFD2P54860 tV(CAC)DtV(CAC)D 73 nt3.78□□□□□ -1.8
UFD2P54860 tV(CAC)HtV(CAC)H 73 nt3.78□□□□□ -1.8
UFD2P54860 ANB1YJR047C 474 nt3.78□□□□□ -1.8
UFD2P54860 SHH3YMR118C 591 nt3.78□□□□□ -1.8
UFD2P54860 GOT1YMR292W 417 nt3.78□□□□□ -1.8
UFD2P54860 MYO3YKL129C 3819 nt3.77□□□□□ -1.81
UFD2P54860 SGO1YOR073W 1773 nt3.77□□□□□ -1.81
UFD2P54860 LEU3YLR451W 2661 nt3.77□□□□□ -1.81
UFD2P54860 URA2YJL130C 6645 nt3.77□□□□□ -1.81
UFD2P54860 tC(GCA)BtC(GCA)B 72 nt3.77□□□□□ -1.81
UFD2P54860 tC(GCA)GtC(GCA)G 72 nt3.77□□□□□ -1.81
UFD2P54860 tC(GCA)P1tC(GCA)P1 72 nt3.77□□□□□ -1.81
UFD2P54860 tC(GCA)P2tC(GCA)P2 72 nt3.77□□□□□ -1.81
UFD2P54860 YDR344CYDR344C 444 nt3.77□□□□□ -1.81
UFD2P54860 RPS17BYDR447C 411 nt3.77□□□□□ -1.81
UFD2P54860 VPS3YDR495C 3036 nt3.77□□□□□ -1.81
UFD2P54860 YJL181WYJL181W 1836 nt3.77□□□□□ -1.81
UFD2P54860 YLR352WYLR352W 2424 nt3.76□□□□□ -1.81
UFD2P54860 CDC24YAL041W 2565 nt3.76□□□□□ -1.81
UFD2P54860 BRO1YPL084W 2535 nt3.76□□□□□ -1.81
UFD2P54860 YGR027W-BYGR027W-B 5268 nt3.76□□□□□ -1.81
UFD2P54860 YLR227W-BYLR227W-B 5268 nt3.76□□□□□ -1.81
UFD2P54860 YPR158C-DYPR158C-D 5268 nt3.76□□□□□ -1.81
UFD2P54860 CDC36YDL165W 576 nt3.76□□□□□ -1.81
UFD2P54860 RPS24AYER074W 408 nt3.76□□□□□ -1.81
UFD2P54860 GEP4YHR100C 558 nt3.76□□□□□ -1.81
UFD2P54860 RPS18BYML026C 441 nt3.76□□□□□ -1.81
UFD2P54860 YOR072W-AYOR072W-A 249 nt3.76□□□□□ -1.81
UFD2P54860 YPL182CYPL182C 384 nt3.76□□□□□ -1.81
UFD2P54860 REV1YOR346W 2958 nt3.76□□□□□ -1.81
UFD2P54860 YGR069WYGR069W 336 nt3.75□□□□□ -1.81
UFD2P54860 RPS23AYGR118W 438 nt3.75□□□□□ -1.81
UFD2P54860 YGR174W-AYGR174W-A 87 nt3.75□□□□□ -1.81
UFD2P54860 RPL8BYLL045C 771 nt3.75□□□□□ -1.81
UFD2P54860 YOR073W-AYOR073W-A 234 nt3.75□□□□□ -1.81
UFD2P54860 YDR034C-DYDR034C-D 5313 nt3.75□□□□□ -1.81
UFD2P54860 REC8YPR007C 2043 nt3.75□□□□□ -1.81
UFD2P54860 COG3YER157W 2406 nt3.74□□□□□ -1.81
UFD2P54860 TLC1TLC1 1301 nt3.74□□□□□ -1.81
UFD2P54860 ETP1YHL010C 1758 nt3.74□□□□□ -1.81
UFD2P54860 PSF1YDR013W 627 nt3.74□□□□□ -1.81
UFD2P54860 SMA2YML066C 1110 nt3.74□□□□□ -1.81
UFD2P54860 YTA7YGR270W 4140 nt3.73□□□□□ -1.81
UFD2P54860 SNT1YCR033W 3681 nt3.73□□□□□ -1.81
UFD2P54860 MYO5YMR109W 3660 nt3.73□□□□□ -1.81
UFD2P54860 SYT1YPR095C 3681 nt3.73□□□□□ -1.81
UFD2P54860 STU2YLR045C 2667 nt3.73□□□□□ -1.81
UFD2P54860 snR79snR79 84 nt3.73□□□□□ -1.81
UFD2P54860 CSN9YDR179C 489 nt3.73□□□□□ -1.81
UFD2P54860 Q0092Q0092 141 nt3.73□□□□□ -1.81
UFD2P54860 YMR31YFR049W 372 nt3.73□□□□□ -1.81
UFD2P54860 GPI14YJR013W 1212 nt3.73□□□□□ -1.81
UFD2P54860 TOM70YNL121C 1854 nt3.73□□□□□ -1.81
UFD2P54860 HTL1YCR020W-B 237 nt3.72□□□□□ -1.81
UFD2P54860 SPT4YGR063C 309 nt3.72□□□□□ -1.81
UFD2P54860 YJL020W-AYJL020W-A 258 nt3.72□□□□□ -1.81
UFD2P54860 NOP4YPL043W 2058 nt3.71□□□□□ -1.82
UFD2P54860 YDL211CYDL211C 1119 nt3.71□□□□□ -1.82
UFD2P54860 YDR464C-AYDR464C-A 189 nt3.71□□□□□ -1.82
UFD2P54860 ALG13YGL047W 609 nt3.71□□□□□ -1.82
UFD2P54860 YHR214C-EYHR214C-E 300 nt3.71□□□□□ -1.82
UFD2P54860 HSK3YKL138C-A 210 nt3.71□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms