Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.29■■□□□ 1.16
CDR1P51861 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDR1P51861 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDR1P51861 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CDR1P51861 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDR1P51861 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
CDR1P51861 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.28■■□□□ 1.16
CDR1P51861 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDR1P51861 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDR1P51861 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDR1P51861 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.28■■□□□ 1.16
CDR1P51861 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CDR1P51861 AC098934.4-201ENST00000564127 592 ntBASIC22.28■■□□□ 1.16
CDR1P51861 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.28■■□□□ 1.16
CDR1P51861 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDR1P51861 AC068338.2-201ENST00000563278 1430 ntBASIC22.28■■□□□ 1.16
CDR1P51861 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDR1P51861 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.28■■□□□ 1.16
CDR1P51861 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDR1P51861 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.28■■□□□ 1.16
CDR1P51861 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.28■■□□□ 1.16
CDR1P51861 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.28■■□□□ 1.16
CDR1P51861 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDR1P51861 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.28■■□□□ 1.16
CDR1P51861 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDR1P51861 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.27■■□□□ 1.16
CDR1P51861 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDR1P51861 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.27■■□□□ 1.16
CDR1P51861 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDR1P51861 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CDR1P51861 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDR1P51861 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.27■■□□□ 1.16
CDR1P51861 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDR1P51861 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
CDR1P51861 GUSBP6-202ENST00000438529 1198 ntBASIC22.27■■□□□ 1.16
CDR1P51861 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.27■■□□□ 1.16
CDR1P51861 AC105036.2-201ENST00000569468 176 ntBASIC22.27■■□□□ 1.16
CDR1P51861 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.27■■□□□ 1.16
CDR1P51861 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDR1P51861 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDR1P51861 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CDR1P51861 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDR1P51861 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDR1P51861 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
CDR1P51861 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDR1P51861 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.26■■□□□ 1.15
CDR1P51861 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CDR1P51861 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDR1P51861 AC093787.1-201ENST00000450396 207 ntBASIC22.26■■□□□ 1.15
CDR1P51861 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDR1P51861 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.26■■□□□ 1.15
CDR1P51861 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.26■■□□□ 1.15
CDR1P51861 AL121832.2-201ENST00000610979 668 ntBASIC22.26■■□□□ 1.15
CDR1P51861 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.26■■□□□ 1.15
CDR1P51861 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDR1P51861 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDR1P51861 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDR1P51861 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CDR1P51861 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDR1P51861 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDR1P51861 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.25■■□□□ 1.15
CDR1P51861 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.25■■□□□ 1.15
CDR1P51861 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDR1P51861 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDR1P51861 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.25■■□□□ 1.15
CDR1P51861 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.25■■□□□ 1.15
CDR1P51861 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.25■■□□□ 1.15
CDR1P51861 CYP2T1P-201ENST00000432607 1285 ntBASIC22.25■■□□□ 1.15
CDR1P51861 TSPY6P-201ENST00000448518 926 ntBASIC22.25■■□□□ 1.15
CDR1P51861 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.25■■□□□ 1.15
CDR1P51861 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.25■■□□□ 1.15
CDR1P51861 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.25■■□□□ 1.15
CDR1P51861 AC016405.3-201ENST00000607710 860 ntBASIC22.25■■□□□ 1.15
CDR1P51861 AC120498.10-201ENST00000621827 505 ntBASIC22.25■■□□□ 1.15
CDR1P51861 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDR1P51861 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDR1P51861 AC005229.4-201ENST00000610085 2198 ntBASIC22.25■■□□□ 1.15
CDR1P51861 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.25■■□□□ 1.15
CDR1P51861 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDR1P51861 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDR1P51861 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.24■■□□□ 1.15
CDR1P51861 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDR1P51861 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CDR1P51861 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDR1P51861 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDR1P51861 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDR1P51861 POU5F1P4-201ENST00000413175 1085 ntBASIC22.24■■□□□ 1.15
CDR1P51861 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.24■■□□□ 1.15
CDR1P51861 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.24■■□□□ 1.15
CDR1P51861 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDR1P51861 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.24■■□□□ 1.15
CDR1P51861 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.24■■□□□ 1.15
CDR1P51861 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDR1P51861 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDR1P51861 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CDR1P51861 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.24■■□□□ 1.15
CDR1P51861 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDR1P51861 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.23■■□□□ 1.15
CDR1P51861 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDR1P51861 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms