Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
CLCN4P51793 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLCN4P51793 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.64■■□□□ 1.05
CLCN4P51793 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLCN4P51793 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.64■■□□□ 1.05
CLCN4P51793 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN4P51793 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN4P51793 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.63■■□□□ 1.05
CLCN4P51793 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN4P51793 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.63■■□□□ 1.05
CLCN4P51793 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.63■■□□□ 1.05
CLCN4P51793 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN4P51793 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.63■■□□□ 1.05
CLCN4P51793 AC012618.2-201ENST00000428058 849 ntBASIC21.63■■□□□ 1.05
CLCN4P51793 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLCN4P51793 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.63■■□□□ 1.05
CLCN4P51793 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.63■■□□□ 1.05
CLCN4P51793 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.63■■□□□ 1.05
CLCN4P51793 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
CLCN4P51793 AC005829.2-201ENST00000571422 1056 ntBASIC21.63■■□□□ 1.05
CLCN4P51793 AC233702.5-201ENST00000584107 538 ntBASIC21.63■■□□□ 1.05
CLCN4P51793 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.63■■□□□ 1.05
CLCN4P51793 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CLCN4P51793 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.63■■□□□ 1.05
CLCN4P51793 AC124016.1-201ENST00000609552 612 ntBASIC21.63■■□□□ 1.05
CLCN4P51793 AC120498.8-201ENST00000614275 531 ntBASIC21.63■■□□□ 1.05
CLCN4P51793 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN4P51793 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.63■■□□□ 1.05
CLCN4P51793 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN4P51793 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CLCN4P51793 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN4P51793 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN4P51793 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLCN4P51793 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 RPS2P55-201ENST00000397318 883 ntBASIC21.62■■□□□ 1.05
CLCN4P51793 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCN4P51793 AC133681.1-201ENST00000465482 601 ntBASIC21.62■■□□□ 1.05
CLCN4P51793 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 AC107956.1-201ENST00000494359 873 ntBASIC21.62■■□□□ 1.05
CLCN4P51793 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.62■■□□□ 1.05
CLCN4P51793 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.62■■□□□ 1.05
CLCN4P51793 REXO1L12P-201ENST00000622156 912 ntBASIC21.62■■□□□ 1.05
CLCN4P51793 AL023875.1-201ENST00000640777 796 ntBASIC21.62■■□□□ 1.05
CLCN4P51793 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLCN4P51793 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLCN4P51793 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN4P51793 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN4P51793 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCN4P51793 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCN4P51793 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
CLCN4P51793 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.61■■□□□ 1.05
CLCN4P51793 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.61■■□□□ 1.05
CLCN4P51793 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN4P51793 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN4P51793 PGM5P4-201ENST00000421970 445 ntBASIC21.61■■□□□ 1.05
CLCN4P51793 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN4P51793 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN4P51793 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.61■■□□□ 1.05
CLCN4P51793 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLCN4P51793 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.61■■□□□ 1.05
CLCN4P51793 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN4P51793 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLCN4P51793 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.61■■□□□ 1.05
CLCN4P51793 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCN4P51793 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CLCN4P51793 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLCN4P51793 AC211429.1-201ENST00000415277 523 ntBASIC21.6■■□□□ 1.05
CLCN4P51793 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.6■■□□□ 1.05
CLCN4P51793 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.6■■□□□ 1.05
CLCN4P51793 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
CLCN4P51793 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.6■■□□□ 1.05
CLCN4P51793 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCN4P51793 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.6■■□□□ 1.05
CLCN4P51793 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCN4P51793 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.6■■□□□ 1.05
CLCN4P51793 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.6■■□□□ 1.05
CLCN4P51793 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLCN4P51793 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CLCN4P51793 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CLCN4P51793 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CLCN4P51793 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN4P51793 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCN4P51793 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms