Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC9A3P48764 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC9A3P48764 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC9A3P48764 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC9A3P48764 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC9A3P48764 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC9A3P48764 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC9A3P48764 AC005837.3-201ENST00000612163 286 ntBASIC18.69■□□□□ 0.58
SLC9A3P48764 AC120498.10-201ENST00000621827 505 ntBASIC18.69■□□□□ 0.58
SLC9A3P48764 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC9A3P48764 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SLC9A3P48764 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC9A3P48764 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC9A3P48764 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC9A3P48764 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC9A3P48764 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC9A3P48764 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC9A3P48764 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC9A3P48764 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SLC9A3P48764 AC105265.2-201ENST00000467189 838 ntBASIC18.68■□□□□ 0.58
SLC9A3P48764 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC9A3P48764 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC9A3P48764 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC9A3P48764 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC9A3P48764 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC9A3P48764 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC9A3P48764 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC9A3P48764 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC9A3P48764 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC9A3P48764 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SLC9A3P48764 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC9A3P48764 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC9A3P48764 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC9A3P48764 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC9A3P48764 PCDHAC2-203ENST00000615316 3011 ntBASIC18.67■□□□□ 0.58
SLC9A3P48764 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC9A3P48764 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC9A3P48764 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC9A3P48764 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC9A3P48764 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC9A3P48764 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC9A3P48764 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SLC9A3P48764 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC9A3P48764 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC9A3P48764 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC9A3P48764 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC9A3P48764 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC9A3P48764 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
SLC9A3P48764 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC9A3P48764 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC9A3P48764 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC9A3P48764 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
SLC9A3P48764 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SLC9A3P48764 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 AC245052.3-201ENST00000450182 901 ntBASIC18.66■□□□□ 0.58
SLC9A3P48764 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC9A3P48764 AFG3L1P-217ENST00000557444 2447 ntBASIC18.66■□□□□ 0.58
SLC9A3P48764 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC9A3P48764 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC9A3P48764 FP700111.2-201ENST00000619190 1892 ntBASIC18.66■□□□□ 0.58
SLC9A3P48764 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC9A3P48764 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 LINC02228-203ENST00000641970 1355 ntBASIC18.66■□□□□ 0.58
SLC9A3P48764 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC9A3P48764 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC9A3P48764 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC9A3P48764 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLC9A3P48764 AC027702.1-201ENST00000563810 1770 ntBASIC18.65■□□□□ 0.58
SLC9A3P48764 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC9A3P48764 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC9A3P48764 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC9A3P48764 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC9A3P48764 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC9A3P48764 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC9A3P48764 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
SLC9A3P48764 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC9A3P48764 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC9A3P48764 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC9A3P48764 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms