Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRGP48443 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RXRGP48443 KRT17P1-201ENST00000399211 1546 ntBASIC20.44■□□□□ 0.86
RXRGP48443 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RXRGP48443 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
RXRGP48443 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRGP48443 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.44■□□□□ 0.86
RXRGP48443 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.44■□□□□ 0.86
RXRGP48443 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RXRGP48443 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RXRGP48443 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RXRGP48443 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.44■□□□□ 0.86
RXRGP48443 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
RXRGP48443 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RXRGP48443 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRGP48443 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RXRGP48443 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRGP48443 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRGP48443 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRGP48443 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.43■□□□□ 0.86
RXRGP48443 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.43■□□□□ 0.86
RXRGP48443 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRGP48443 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.43■□□□□ 0.86
RXRGP48443 AC142381.4-202ENST00000563973 229 ntBASIC20.43■□□□□ 0.86
RXRGP48443 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.43■□□□□ 0.86
RXRGP48443 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.43■□□□□ 0.86
RXRGP48443 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RXRGP48443 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RXRGP48443 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RXRGP48443 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RXRGP48443 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.42■□□□□ 0.86
RXRGP48443 AL355472.2-201ENST00000422958 438 ntBASIC20.42■□□□□ 0.86
RXRGP48443 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.42■□□□□ 0.86
RXRGP48443 AP003097.1-201ENST00000530657 1135 ntBASIC20.42■□□□□ 0.86
RXRGP48443 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RXRGP48443 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RXRGP48443 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.42■□□□□ 0.86
RXRGP48443 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RXRGP48443 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.41■□□□□ 0.86
RXRGP48443 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.41■□□□□ 0.86
RXRGP48443 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.41■□□□□ 0.86
RXRGP48443 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.41■□□□□ 0.86
RXRGP48443 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.41■□□□□ 0.86
RXRGP48443 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.41■□□□□ 0.86
RXRGP48443 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RXRGP48443 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
RXRGP48443 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.41■□□□□ 0.86
RXRGP48443 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RXRGP48443 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.4■□□□□ 0.86
RXRGP48443 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RXRGP48443 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RXRGP48443 MCRIP2P1-201ENST00000394346 511 ntBASIC20.4■□□□□ 0.86
RXRGP48443 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.4■□□□□ 0.86
RXRGP48443 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.4■□□□□ 0.86
RXRGP48443 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 AL589743.5-201ENST00000616611 1050 ntBASIC20.4■□□□□ 0.86
RXRGP48443 HLA-B-256ENST00000639848 1089 ntBASIC20.4■□□□□ 0.86
RXRGP48443 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RXRGP48443 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RXRGP48443 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RXRGP48443 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RXRGP48443 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RXRGP48443 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RXRGP48443 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.39■□□□□ 0.86
RXRGP48443 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RXRGP48443 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RXRGP48443 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.39■□□□□ 0.85
RXRGP48443 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RXRGP48443 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RXRGP48443 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RXRGP48443 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RXRGP48443 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms