Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 COG3YER157W 2406 nt2.52□□□□□ -2.01 RIP-Chip
SCD6P45978 YDR157WYDR157W 402 nt2.52□□□□□ -2.01
SCD6P45978 SMB1YER029C 591 nt2.52□□□□□ -2.01 RIP-Chip
SCD6P45978 YMR31YFR049W 372 nt2.52□□□□□ -2.01
SCD6P45978 Q0142Q0142 177 nt2.52□□□□□ -2.01
SCD6P45978 YHL006W-AYHL006W-A 354 nt2.52□□□□□ -2.01
SCD6P45978 AYR1YIL124W 894 nt2.52□□□□□ -2.01 RIP-Chip
SCD6P45978 YLR406C-AYLR406C-A 150 nt2.52□□□□□ -2.01
SCD6P45978 YNL046WYNL046W 519 nt2.52□□□□□ -2.01
SCD6P45978 ISU1YPL135W 498 nt2.52□□□□□ -2.01
SCD6P45978 SPO23YBR250W 1572 nt2.52□□□□□ -2.01
SCD6P45978 FUS1YCL027W 1539 nt2.52□□□□□ -2.01
SCD6P45978 SCD5YOR329C 2619 nt2.52□□□□□ -2.01
SCD6P45978 STE11YLR362W 2154 nt2.51□□□□□ -2.01
SCD6P45978 SPE1YKL184W 1401 nt2.51□□□□□ -2.01
SCD6P45978 AGA2YGL032C 264 nt2.51□□□□□ -2.01
SCD6P45978 YPS5YGL259W 498 nt2.51□□□□□ -2.01
SCD6P45978 RMP1YLR145W 606 nt2.51□□□□□ -2.01
SCD6P45978 MRPL33YMR286W 261 nt2.51□□□□□ -2.01
SCD6P45978 NSL1YPL233W 651 nt2.51□□□□□ -2.01
SCD6P45978 GCD10YNL062C 1437 nt2.51□□□□□ -2.01
SCD6P45978 POM152YMR129W 4014 nt2.5□□□□□ -2.01 RIP-Chip
SCD6P45978 TIM11YDR322C-A 291 nt2.5□□□□□ -2.01
SCD6P45978 TSA2YDR453C 591 nt2.5□□□□□ -2.01
SCD6P45978 HUR1YGL168W 333 nt2.5□□□□□ -2.01
SCD6P45978 RNR4YGR180C 1038 nt2.5□□□□□ -2.01
SCD6P45978 SPB1YCL054W 2526 nt2.49□□□□□ -2.01
SCD6P45978 APC2YLR127C 2562 nt2.49□□□□□ -2.01
SCD6P45978 SUL1YBR294W 2580 nt2.49□□□□□ -2.01
SCD6P45978 YDR118W-AYDR118W-A 117 nt2.49□□□□□ -2.01
SCD6P45978 DYN2YDR424C 279 nt2.49□□□□□ -2.01
SCD6P45978 YER006C-AYER006C-A 318 nt2.49□□□□□ -2.01
SCD6P45978 VTC1YER072W 390 nt2.49□□□□□ -2.01
SCD6P45978 AAD16YFL057C 459 nt2.49□□□□□ -2.01
SCD6P45978 LAG1YHL003C 1236 nt2.49□□□□□ -2.01
SCD6P45978 YHR125WYHR125W 306 nt2.49□□□□□ -2.01
SCD6P45978 BET3YKR068C 582 nt2.49□□□□□ -2.01
SCD6P45978 LCL2YLR104W 396 nt2.49□□□□□ -2.01 RIP-Chip
SCD6P45978 YLR154W-EYLR154W-E 204 nt2.49□□□□□ -2.01
SCD6P45978 YPR170W-AYPR170W-A 186 nt2.49□□□□□ -2.01
SCD6P45978 YHR214C-CYHR214C-C 1437 nt2.49□□□□□ -2.01
SCD6P45978 DUG2YBR281C 2637 nt2.49□□□□□ -2.01 RIP-Chip
SCD6P45978 SMC6YLR383W 3345 nt2.48□□□□□ -2.01 RIP-Chip
SCD6P45978 FIR1YER032W 2631 nt2.48□□□□□ -2.01
SCD6P45978 RLF2YPR018W 1821 nt2.48□□□□□ -2.01 RIP-Chip
SCD6P45978 RPS17BYDR447C 411 nt2.48□□□□□ -2.01
SCD6P45978 IRC4YDR540C 540 nt2.48□□□□□ -2.01 RIP-Chip
SCD6P45978 FYV4YHR059W 393 nt2.48□□□□□ -2.01
SCD6P45978 YLR101CYLR101C 396 nt2.48□□□□□ -2.01
SCD6P45978 YMR001C-AYMR001C-A 231 nt2.48□□□□□ -2.01
SCD6P45978 SEN15YMR059W 387 nt2.48□□□□□ -2.01
SCD6P45978 TIF11YMR260C 462 nt2.48□□□□□ -2.01
SCD6P45978 YPR012WYPR012W 255 nt2.48□□□□□ -2.01
SCD6P45978 KIN82YCR091W 2163 nt2.48□□□□□ -2.01
SCD6P45978 SWR1YDR334W 4545 nt2.48□□□□□ -2.01 RIP-Chip
SCD6P45978 TRM2YKR056W 1920 nt2.48□□□□□ -2.01
SCD6P45978 SKT5YBL061C 2091 nt2.48□□□□□ -2.01 RIP-Chip
SCD6P45978 DPB11YJL090C 2295 nt2.47□□□□□ -2.01 RIP-Chip
SCD6P45978 YIL030W-AYIL030W-A 339 nt2.47□□□□□ -2.01
SCD6P45978 YJR023CYJR023C 402 nt2.47□□□□□ -2.01
SCD6P45978 VPH2YKL119C 648 nt2.47□□□□□ -2.01 RIP-Chip
SCD6P45978 RPL37AYLR185W 267 nt2.47□□□□□ -2.01
SCD6P45978 SWM2YNR004W 441 nt2.47□□□□□ -2.01
SCD6P45978 ESF2YNR054C 951 nt2.47□□□□□ -2.01
SCD6P45978 YPL197CYPL197C 414 nt2.47□□□□□ -2.01
SCD6P45978 YIL080WYIL080W 4722 nt2.47□□□□□ -2.01
SCD6P45978 TRA1YHR099W 11235 nt2.47□□□□□ -2.01
SCD6P45978 YBT1YLL048C 4986 nt2.47□□□□□ -2.01
SCD6P45978 JSN1YJR091C 3276 nt2.46□□□□□ -2.01
SCD6P45978 IES5YER092W 378 nt2.46□□□□□ -2.02
SCD6P45978 CMS1YLR003C 876 nt2.46□□□□□ -2.02
SCD6P45978 YLR269CYLR269C 351 nt2.46□□□□□ -2.02
SCD6P45978 RPB11YOL005C 363 nt2.46□□□□□ -2.02
SCD6P45978 YNL034WYNL034W 1839 nt2.46□□□□□ -2.02
SCD6P45978 PSK2YOL045W 3306 nt2.46□□□□□ -2.02 RIP-Chip
SCD6P45978 YHR175W-AYHR175W-A 150 nt2.45□□□□□ -2.02
SCD6P45978 YJR079WYJR079W 330 nt2.45□□□□□ -2.02
SCD6P45978 YLR334CYLR334C 381 nt2.45□□□□□ -2.02
SCD6P45978 RPS1AYLR441C 768 nt2.45□□□□□ -2.02
SCD6P45978 CMC2YBL059C-A 330 nt2.45□□□□□ -2.02
SCD6P45978 MSS18YPR134W 807 nt2.45□□□□□ -2.02 RIP-Chip
SCD6P45978 LEU3YLR451W 2661 nt2.45□□□□□ -2.02 RIP-Chip
SCD6P45978 MDM32YOR147W 1869 nt2.45□□□□□ -2.02 RIP-Chip
SCD6P45978 SSN2YDR443C 4263 nt2.44□□□□□ -2.02 RIP-Chip
SCD6P45978 SVL3YPL032C 2478 nt2.44□□□□□ -2.02 RIP-Chip
SCD6P45978 ECM5YMR176W 4236 nt2.44□□□□□ -2.02
SCD6P45978 GPI17YDR434W 1605 nt2.44□□□□□ -2.02 RIP-Chip
SCD6P45978 YIL166CYIL166C 1629 nt2.44□□□□□ -2.02
SCD6P45978 NBL1YHR199C-A 222 nt2.44□□□□□ -2.02
SCD6P45978 PEP8YJL053W 1140 nt2.44□□□□□ -2.02
SCD6P45978 DGK1YOR311C 873 nt2.44□□□□□ -2.02
SCD6P45978 LEE1YPL054W 906 nt2.44□□□□□ -2.02
SCD6P45978 RNH70YGR276C 1662 nt2.44□□□□□ -2.02 RIP-Chip
SCD6P45978 BNR1YIL159W 4128 nt2.44□□□□□ -2.02 RIP-Chip
SCD6P45978 ADK1YDR226W 669 nt2.43□□□□□ -2.02
SCD6P45978 GPI19YDR437W 423 nt2.43□□□□□ -2.02
SCD6P45978 YER135CYER135C 393 nt2.43□□□□□ -2.02
SCD6P45978 tR(ACG)Q2tR(ACG)Q2 74 nt2.43□□□□□ -2.02
SCD6P45978 TPM2YIL138C 486 nt2.43□□□□□ -2.02
SCD6P45978 YAL026C-AYAL026C-A 438 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms