Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKN2CP42773 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKN2CP42773 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKN2CP42773 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKN2CP42773 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKN2CP42773 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKN2CP42773 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CDKN2CP42773 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDKN2CP42773 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKN2CP42773 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKN2CP42773 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDKN2CP42773 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.33■□□□□ 0.69
CDKN2CP42773 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKN2CP42773 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKN2CP42773 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKN2CP42773 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKN2CP42773 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKN2CP42773 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.33■□□□□ 0.68
CDKN2CP42773 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKN2CP42773 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKN2CP42773 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKN2CP42773 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKN2CP42773 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.33■□□□□ 0.68
CDKN2CP42773 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CDKN2CP42773 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDKN2CP42773 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDKN2CP42773 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDKN2CP42773 LINC02228-203ENST00000641970 1355 ntBASIC19.32■□□□□ 0.68
CDKN2CP42773 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKN2CP42773 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKN2CP42773 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKN2CP42773 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKN2CP42773 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDKN2CP42773 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDKN2CP42773 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.32■□□□□ 0.68
CDKN2CP42773 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKN2CP42773 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKN2CP42773 DUX4L2-201ENST00000561772 1275 ntBASIC19.32■□□□□ 0.68
CDKN2CP42773 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.32■□□□□ 0.68
CDKN2CP42773 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
CDKN2CP42773 AC120498.10-201ENST00000621827 505 ntBASIC19.32■□□□□ 0.68
CDKN2CP42773 DUX4L6-201ENST00000626483 1275 ntBASIC19.32■□□□□ 0.68
CDKN2CP42773 DUX4L1-201ENST00000627662 1275 ntBASIC19.32■□□□□ 0.68
CDKN2CP42773 DUX4L8-201ENST00000629013 1275 ntBASIC19.32■□□□□ 0.68
CDKN2CP42773 DUX4L3-201ENST00000630187 1275 ntBASIC19.32■□□□□ 0.68
CDKN2CP42773 DUX4L7-201ENST00000630678 1275 ntBASIC19.32■□□□□ 0.68
CDKN2CP42773 DUX4L5-201ENST00000630834 1275 ntBASIC19.32■□□□□ 0.68
CDKN2CP42773 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKN2CP42773 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CDKN2CP42773 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKN2CP42773 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKN2CP42773 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKN2CP42773 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKN2CP42773 AP001160.3-201ENST00000601484 763 ntBASIC19.31■□□□□ 0.68
CDKN2CP42773 MIR2861-201ENST00000636310 90 ntBASIC19.31■□□□□ 0.68
CDKN2CP42773 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDKN2CP42773 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKN2CP42773 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKN2CP42773 AC116050.2-201ENST00000612102 1779 ntBASIC19.31■□□□□ 0.68
CDKN2CP42773 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKN2CP42773 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKN2CP42773 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKN2CP42773 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKN2CP42773 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKN2CP42773 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CDKN2CP42773 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.3■□□□□ 0.68
CDKN2CP42773 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.3■□□□□ 0.68
CDKN2CP42773 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDKN2CP42773 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.3■□□□□ 0.68
CDKN2CP42773 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.3■□□□□ 0.68
CDKN2CP42773 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.3■□□□□ 0.68
CDKN2CP42773 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDKN2CP42773 AC007952.6-201ENST00000573168 2673 ntBASIC19.3■□□□□ 0.68
CDKN2CP42773 AC003957.1-201ENST00000625108 2673 ntBASIC19.3■□□□□ 0.68
CDKN2CP42773 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 SMG8-203ENST00000578922 2178 ntBASIC19.3■□□□□ 0.68
CDKN2CP42773 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKN2CP42773 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDKN2CP42773 TCF3P1-201ENST00000423021 1937 ntBASIC19.29■□□□□ 0.68
CDKN2CP42773 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKN2CP42773 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.29■□□□□ 0.68
CDKN2CP42773 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKN2CP42773 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKN2CP42773 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKN2CP42773 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKN2CP42773 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.29■□□□□ 0.68
CDKN2CP42773 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKN2CP42773 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.29■□□□□ 0.68
CDKN2CP42773 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms