Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 YBR062CYBR062C 543 nt1.35□□□□□ -2.19
CUP9P41817 MDM20YOL076W 2391 nt1.35□□□□□ -2.19
CUP9P41817 SYH1YPL105C 2550 nt1.35□□□□□ -2.19
CUP9P41817 YDR341CYDR341C 1824 nt1.34□□□□□ -2.19
CUP9P41817 ECM25YJL201W 1800 nt1.34□□□□□ -2.19
CUP9P41817 YNL034WYNL034W 1839 nt1.34□□□□□ -2.19
CUP9P41817 YOR343W-BYOR343W-B 5313 nt1.34□□□□□ -2.19
CUP9P41817 SEC28YIL076W 891 nt1.34□□□□□ -2.19
CUP9P41817 SUI2YJR007W 915 nt1.34□□□□□ -2.19
CUP9P41817 YLR412C-AYLR412C-A 207 nt1.34□□□□□ -2.19
CUP9P41817 YMR173W-AYMR173W-A 1185 nt1.34□□□□□ -2.19
CUP9P41817 DIA1YMR316W 1011 nt1.34□□□□□ -2.19
CUP9P41817 ARL3YPL051W 597 nt1.34□□□□□ -2.19
CUP9P41817 GNT1YOR320C 1476 nt1.34□□□□□ -2.19
CUP9P41817 SOK2YMR016C 2358 nt1.34□□□□□ -2.2
CUP9P41817 TUS1YLR425W 3924 nt1.33□□□□□ -2.2
CUP9P41817 YGR109W-AYGR109W-A 873 nt1.33□□□□□ -2.2
CUP9P41817 YHL002C-AYHL002C-A 489 nt1.33□□□□□ -2.2
CUP9P41817 AIM23YJL131C 1071 nt1.33□□□□□ -2.2
CUP9P41817 SRP21YKL122C 504 nt1.33□□□□□ -2.2
CUP9P41817 COX8YLR395C 237 nt1.33□□□□□ -2.2
CUP9P41817 YPL238CYPL238C 390 nt1.33□□□□□ -2.2
CUP9P41817 YPR147CYPR147C 915 nt1.33□□□□□ -2.2
CUP9P41817 YBR174CYBR174C 315 nt1.33□□□□□ -2.2
CUP9P41817 ADF1YCL058W-A 342 nt1.33□□□□□ -2.2
CUP9P41817 NAN1YPL126W 2691 nt1.33□□□□□ -2.2
CUP9P41817 YBP1YBR216C 2025 nt1.32□□□□□ -2.2
CUP9P41817 RKM1YPL208W 1752 nt1.32□□□□□ -2.2
CUP9P41817 YCR087C-AYCR087C-A 462 nt1.32□□□□□ -2.2
CUP9P41817 RUB1YDR139C 234 nt1.32□□□□□ -2.2
CUP9P41817 MSL1YIR009W 336 nt1.32□□□□□ -2.2
CUP9P41817 ALB1YJL122W 528 nt1.32□□□□□ -2.2
CUP9P41817 TEN1YLR010C 483 nt1.32□□□□□ -2.2
CUP9P41817 TBS1YBR150C 3285 nt1.32□□□□□ -2.2
CUP9P41817 RAD18YCR066W 1464 nt1.31□□□□□ -2.2
CUP9P41817 BPH1YCR032W 6504 nt1.31□□□□□ -2.2
CUP9P41817 PET309YLR067C 2898 nt1.31□□□□□ -2.2
CUP9P41817 CDC50YCR094W 1176 nt1.31□□□□□ -2.2
CUP9P41817 CRD1YDL142C 852 nt1.31□□□□□ -2.2
CUP9P41817 PGD1YGL025C 1194 nt1.31□□□□□ -2.2
CUP9P41817 YGL069CYGL069C 465 nt1.31□□□□□ -2.2
CUP9P41817 NOP10YHR072W-A 177 nt1.31□□□□□ -2.2
CUP9P41817 YJL156W-AYJL156W-A 222 nt1.31□□□□□ -2.2
CUP9P41817 SPC110YDR356W 2835 nt1.31□□□□□ -2.2
CUP9P41817 TFC8YPL007C 1767 nt1.31□□□□□ -2.2
CUP9P41817 YJR039WYJR039W 3366 nt1.31□□□□□ -2.2
CUP9P41817 POL5YEL055C 3069 nt1.31□□□□□ -2.2
CUP9P41817 LST4YKL176C 2487 nt1.3□□□□□ -2.2
CUP9P41817 NAM7YMR080C 2916 nt1.3□□□□□ -2.2
CUP9P41817 SLM1YIL105C 2061 nt1.3□□□□□ -2.2
CUP9P41817 PTC5YOR090C 1719 nt1.3□□□□□ -2.2
CUP9P41817 AHC2YCR082W 387 nt1.3□□□□□ -2.2
CUP9P41817 RPS26BYER131W 360 nt1.3□□□□□ -2.2
CUP9P41817 EST3YIL009C-A 546 nt1.3□□□□□ -2.2
CUP9P41817 NCE101YJL205C 162 nt1.3□□□□□ -2.2
CUP9P41817 RPF2YKR081C 1035 nt1.3□□□□□ -2.2
CUP9P41817 NSL1YPL233W 651 nt1.3□□□□□ -2.2
CUP9P41817 YGR130CYGR130C 2451 nt1.3□□□□□ -2.2
CUP9P41817 LEU3YLR451W 2661 nt1.3□□□□□ -2.2
CUP9P41817 YDL157CYDL157C 357 nt1.29□□□□□ -2.2
CUP9P41817 ATC1YDR184C 885 nt1.29□□□□□ -2.2
CUP9P41817 TPK3YKL166C 1197 nt1.29□□□□□ -2.2
CUP9P41817 YMR158C-AYMR158C-A 138 nt1.29□□□□□ -2.2
CUP9P41817 RXT2YBR095C 1293 nt1.29□□□□□ -2.2
CUP9P41817 VID24YBR105C 1089 nt1.29□□□□□ -2.2
CUP9P41817 NGG1YDR176W 2109 nt1.28□□□□□ -2.2
CUP9P41817 SPO22YIL073C 2928 nt1.28□□□□□ -2.2
CUP9P41817 PAU3YCR104W 375 nt1.28□□□□□ -2.2
CUP9P41817 YDR286CYDR286C 345 nt1.28□□□□□ -2.2
CUP9P41817 RPL22BYFL034C-A 369 nt1.28□□□□□ -2.2
CUP9P41817 BTN2YGR142W 1233 nt1.28□□□□□ -2.2
CUP9P41817 SVP26YHR181W 687 nt1.28□□□□□ -2.2
CUP9P41817 TPM2YIL138C 486 nt1.28□□□□□ -2.2
CUP9P41817 LSM7YNL147W 348 nt1.28□□□□□ -2.2
CUP9P41817 RPB5YBR154C 648 nt1.28□□□□□ -2.2
CUP9P41817 MON2YNL297C 4911 nt1.28□□□□□ -2.2
CUP9P41817 CCH1YGR217W 6120 nt1.27□□□□□ -2.21
CUP9P41817 SHS1YDL225W 1656 nt1.27□□□□□ -2.21
CUP9P41817 PBP4YDL053C 558 nt1.27□□□□□ -2.21
CUP9P41817 YDL062WYDL062W 426 nt1.27□□□□□ -2.21
CUP9P41817 RPL31AYDL075W 342 nt1.27□□□□□ -2.21
CUP9P41817 SLU7YDR088C 1149 nt1.27□□□□□ -2.21
CUP9P41817 BTT1YDR252W 450 nt1.27□□□□□ -2.21
CUP9P41817 YGR270C-AYGR270C-A 219 nt1.27□□□□□ -2.21
CUP9P41817 COX6YHR051W 447 nt1.27□□□□□ -2.21
CUP9P41817 AIM18YHR198C 966 nt1.27□□□□□ -2.21
CUP9P41817 TRS20YBR254C 528 nt1.27□□□□□ -2.21
CUP9P41817 TDA9YML081W 3756 nt1.27□□□□□ -2.21
CUP9P41817 YOR019WYOR019W 2193 nt1.27□□□□□ -2.21
CUP9P41817 BFA1YJR053W 1725 nt1.26□□□□□ -2.21
CUP9P41817 SKI3YPR189W 4299 nt1.26□□□□□ -2.21
CUP9P41817 YDL041WYDL041W 354 nt1.26□□□□□ -2.21
CUP9P41817 tH(GUG)E1tH(GUG)E1 72 nt1.26□□□□□ -2.21
CUP9P41817 tH(GUG)E2tH(GUG)E2 72 nt1.26□□□□□ -2.21
CUP9P41817 tH(GUG)G1tH(GUG)G1 72 nt1.26□□□□□ -2.21
CUP9P41817 tH(GUG)G2tH(GUG)G2 72 nt1.26□□□□□ -2.21
CUP9P41817 tH(GUG)HtH(GUG)H 72 nt1.26□□□□□ -2.21
CUP9P41817 tH(GUG)KtH(GUG)K 72 nt1.26□□□□□ -2.21
CUP9P41817 tH(GUG)MtH(GUG)M 72 nt1.26□□□□□ -2.21
CUP9P41817 PRS3YHL011C 963 nt1.26□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms