Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC1P35052 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.38■□□□□ 0.69
GPC1P35052 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.38■□□□□ 0.69
GPC1P35052 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC1P35052 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.38■□□□□ 0.69
GPC1P35052 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GPC1P35052 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
GPC1P35052 LINC01521-201ENST00000504184 1943 ntBASIC19.37■□□□□ 0.69
GPC1P35052 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GPC1P35052 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC1P35052 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC1P35052 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC1P35052 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.37■□□□□ 0.69
GPC1P35052 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 AC097381.1-201ENST00000429019 1296 ntBASIC19.37■□□□□ 0.69
GPC1P35052 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.37■□□□□ 0.69
GPC1P35052 NTF6G-201ENST00000591094 616 ntBASIC19.37■□□□□ 0.69
GPC1P35052 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GPC1P35052 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC1P35052 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GPC1P35052 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GPC1P35052 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.37■□□□□ 0.69
GPC1P35052 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.36■□□□□ 0.69
GPC1P35052 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GPC1P35052 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
GPC1P35052 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC1P35052 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GPC1P35052 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC1P35052 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.36■□□□□ 0.69
GPC1P35052 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC1P35052 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC1P35052 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.36■□□□□ 0.69
GPC1P35052 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.36■□□□□ 0.69
GPC1P35052 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
GPC1P35052 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 AC116050.2-201ENST00000612102 1779 ntBASIC19.36■□□□□ 0.69
GPC1P35052 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GPC1P35052 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC1P35052 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.35■□□□□ 0.69
GPC1P35052 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC1P35052 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC1P35052 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GPC1P35052 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC1P35052 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC1P35052 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.35■□□□□ 0.69
GPC1P35052 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.35■□□□□ 0.69
GPC1P35052 MIR6821-201ENST00000617625 74 ntBASIC19.35■□□□□ 0.69
GPC1P35052 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC1P35052 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC1P35052 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC1P35052 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC1P35052 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.35■□□□□ 0.69
GPC1P35052 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
GPC1P35052 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GPC1P35052 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC1P35052 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC1P35052 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC1P35052 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC1P35052 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.34■□□□□ 0.69
GPC1P35052 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.34■□□□□ 0.69
GPC1P35052 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.34■□□□□ 0.69
GPC1P35052 KRT18P61-201ENST00000585825 1298 ntBASIC19.34■□□□□ 0.69
GPC1P35052 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.34■□□□□ 0.69
GPC1P35052 AC087623.3-201ENST00000607047 1098 ntBASIC19.34■□□□□ 0.69
GPC1P35052 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.34■□□□□ 0.69
GPC1P35052 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC1P35052 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC1P35052 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.34■□□□□ 0.69
GPC1P35052 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GPC1P35052 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
GPC1P35052 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC1P35052 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC1P35052 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC1P35052 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GPC1P35052 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.34■□□□□ 0.69
GPC1P35052 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.33■□□□□ 0.69
GPC1P35052 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
GPC1P35052 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GPC1P35052 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
GPC1P35052 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms