Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.55■□□□□ 0.88
LSP1P33241 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.55■□□□□ 0.88
LSP1P33241 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSP1P33241 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LSP1P33241 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.54■□□□□ 0.88
LSP1P33241 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LSP1P33241 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSP1P33241 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LSP1P33241 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.54■□□□□ 0.88
LSP1P33241 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.54■□□□□ 0.88
LSP1P33241 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.54■□□□□ 0.88
LSP1P33241 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSP1P33241 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSP1P33241 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSP1P33241 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSP1P33241 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.54■□□□□ 0.88
LSP1P33241 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LSP1P33241 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSP1P33241 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.53■□□□□ 0.88
LSP1P33241 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSP1P33241 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSP1P33241 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LSP1P33241 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSP1P33241 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.53■□□□□ 0.88
LSP1P33241 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSP1P33241 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LSP1P33241 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LSP1P33241 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.53■□□□□ 0.88
LSP1P33241 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LSP1P33241 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSP1P33241 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
LSP1P33241 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSP1P33241 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSP1P33241 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSP1P33241 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.52■□□□□ 0.88
LSP1P33241 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
LSP1P33241 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSP1P33241 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.52■□□□□ 0.88
LSP1P33241 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.52■□□□□ 0.88
LSP1P33241 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LSP1P33241 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LSP1P33241 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LSP1P33241 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
LSP1P33241 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LSP1P33241 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LSP1P33241 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
LSP1P33241 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSP1P33241 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LSP1P33241 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.51■□□□□ 0.87
LSP1P33241 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.51■□□□□ 0.87
LSP1P33241 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LSP1P33241 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
LSP1P33241 MIR4508-201ENST00000584178 70 ntBASIC20.51■□□□□ 0.87
LSP1P33241 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSP1P33241 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LSP1P33241 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSP1P33241 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.51■□□□□ 0.87
LSP1P33241 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSP1P33241 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LSP1P33241 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.5■□□□□ 0.87
LSP1P33241 AC007613.1-201ENST00000572811 2597 ntBASIC20.5■□□□□ 0.87
LSP1P33241 AC011484.1-201ENST00000377652 1995 ntBASIC20.5■□□□□ 0.87
LSP1P33241 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.5■□□□□ 0.87
LSP1P33241 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.5■□□□□ 0.87
LSP1P33241 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSP1P33241 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSP1P33241 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSP1P33241 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.5■□□□□ 0.87
LSP1P33241 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.5■□□□□ 0.87
LSP1P33241 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSP1P33241 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSP1P33241 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSP1P33241 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LSP1P33241 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSP1P33241 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LSP1P33241 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.5■□□□□ 0.87
LSP1P33241 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LSP1P33241 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.49■□□□□ 0.87
LSP1P33241 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSP1P33241 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.49■□□□□ 0.87
LSP1P33241 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSP1P33241 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.49■□□□□ 0.87
LSP1P33241 KRT8P33-201ENST00000508125 1423 ntBASIC20.49■□□□□ 0.87
LSP1P33241 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.49■□□□□ 0.87
LSP1P33241 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSP1P33241 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSP1P33241 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LSP1P33241 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LSP1P33241 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms