Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCN1P31025 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCN1P31025 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.92■□□□□ 0.62
LCN1P31025 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LCN1P31025 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.92■□□□□ 0.62
LCN1P31025 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LCN1P31025 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCN1P31025 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCN1P31025 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LCN1P31025 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCN1P31025 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.92■□□□□ 0.62
LCN1P31025 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCN1P31025 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
LCN1P31025 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.91■□□□□ 0.62
LCN1P31025 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.91■□□□□ 0.62
LCN1P31025 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.91■□□□□ 0.62
LCN1P31025 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LCN1P31025 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.91■□□□□ 0.62
LCN1P31025 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.91■□□□□ 0.62
LCN1P31025 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.91■□□□□ 0.62
LCN1P31025 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.91■□□□□ 0.62
LCN1P31025 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.91■□□□□ 0.62
LCN1P31025 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCN1P31025 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.9■□□□□ 0.62
LCN1P31025 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LCN1P31025 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.9■□□□□ 0.62
LCN1P31025 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.9■□□□□ 0.62
LCN1P31025 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.9■□□□□ 0.62
LCN1P31025 AL137784.2-201ENST00000607332 1000 ntBASIC18.9■□□□□ 0.62
LCN1P31025 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LCN1P31025 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.9■□□□□ 0.62
LCN1P31025 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.9■□□□□ 0.62
LCN1P31025 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCN1P31025 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LCN1P31025 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
LCN1P31025 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.89■□□□□ 0.61
LCN1P31025 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.89■□□□□ 0.61
LCN1P31025 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.89■□□□□ 0.61
LCN1P31025 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LCN1P31025 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
LCN1P31025 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 PGM5P4-201ENST00000421970 445 ntBASIC18.89■□□□□ 0.61
LCN1P31025 AC007322.1-201ENST00000426983 750 ntBASIC18.89■□□□□ 0.61
LCN1P31025 CNN2P6-201ENST00000439038 900 ntBASIC18.89■□□□□ 0.61
LCN1P31025 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.89■□□□□ 0.61
LCN1P31025 AC100791.3-201ENST00000617619 330 ntBASIC18.89■□□□□ 0.61
LCN1P31025 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCN1P31025 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LCN1P31025 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LCN1P31025 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.88■□□□□ 0.61
LCN1P31025 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
LCN1P31025 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCN1P31025 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.88■□□□□ 0.61
LCN1P31025 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.88■□□□□ 0.61
LCN1P31025 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.88■□□□□ 0.61
LCN1P31025 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.88■□□□□ 0.61
LCN1P31025 AC092437.1-201ENST00000624794 1048 ntBASIC18.88■□□□□ 0.61
LCN1P31025 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms