Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN6P29350 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN6P29350 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN6P29350 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN6P29350 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN6P29350 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN6P29350 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPN6P29350 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN6P29350 POU5F1P4-201ENST00000413175 1085 ntBASIC19.42■□□□□ 0.7
PTPN6P29350 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN6P29350 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN6P29350 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPN6P29350 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN6P29350 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN6P29350 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN6P29350 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN6P29350 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PTPN6P29350 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTPN6P29350 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPN6P29350 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPN6P29350 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPN6P29350 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
PTPN6P29350 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN6P29350 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPN6P29350 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.41■□□□□ 0.7
PTPN6P29350 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPN6P29350 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN6P29350 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PTPN6P29350 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN6P29350 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPN6P29350 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTPN6P29350 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPN6P29350 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPN6P29350 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PTPN6P29350 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PTPN6P29350 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTPN6P29350 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN6P29350 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN6P29350 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN6P29350 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PTPN6P29350 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.4■□□□□ 0.7
PTPN6P29350 AC138907.5-202ENST00000569484 235 ntBASIC19.4■□□□□ 0.7
PTPN6P29350 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN6P29350 IKBKGP1-201ENST00000612193 1073 ntBASIC19.4■□□□□ 0.7
PTPN6P29350 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN6P29350 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN6P29350 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN6P29350 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN6P29350 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PTPN6P29350 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN6P29350 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN6P29350 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN6P29350 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN6P29350 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PTPN6P29350 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN6P29350 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN6P29350 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTPN6P29350 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 KRT19P1-201ENST00000405746 1186 ntBASIC19.39■□□□□ 0.69
PTPN6P29350 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 AC008175.2-201ENST00000612840 297 ntBASIC19.39■□□□□ 0.69
PTPN6P29350 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN6P29350 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PTPN6P29350 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PTPN6P29350 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN6P29350 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PTPN6P29350 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN6P29350 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN6P29350 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTPN6P29350 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN6P29350 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN6P29350 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN6P29350 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN6P29350 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN6P29350 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN6P29350 KRT16P2-201ENST00000414673 1423 ntBASIC19.38■□□□□ 0.69
PTPN6P29350 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PTPN6P29350 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPN6P29350 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms