Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 DIA2YOR080W 2199 nt3.29□□□□□ -1.88
HCA4P20448 YJR003CYJR003C 1560 nt3.29□□□□□ -1.88
HCA4P20448 FLO1YAR050W 4614 nt3.29□□□□□ -1.88
HCA4P20448 MAK21YDR060W 3078 nt3.28□□□□□ -1.88
HCA4P20448 MKT1YNL085W 2493 nt3.28□□□□□ -1.88
HCA4P20448 ICR1ICR1 3199 nt3.28□□□□□ -1.88
HCA4P20448 APC11YDL008W 498 nt3.28□□□□□ -1.88
HCA4P20448 YDL068WYDL068W 330 nt3.28□□□□□ -1.88
HCA4P20448 YLR031WYLR031W 561 nt3.28□□□□□ -1.88
HCA4P20448 HHT2YNL031C 411 nt3.28□□□□□ -1.88
HCA4P20448 YNL198CYNL198C 303 nt3.28□□□□□ -1.88
HCA4P20448 snR191snR191 274 nt3.28□□□□□ -1.88
HCA4P20448 BIT61YJL058C 1632 nt3.28□□□□□ -1.88
HCA4P20448 TOM70YNL121C 1854 nt3.28□□□□□ -1.88
HCA4P20448 STE5YDR103W 2754 nt3.28□□□□□ -1.89
HCA4P20448 YDR034C-DYDR034C-D 5313 nt3.28□□□□□ -1.89
HCA4P20448 SRC1YML034W 2505 nt3.27□□□□□ -1.89
HCA4P20448 VOA1YGR106C 798 nt3.27□□□□□ -1.89
HCA4P20448 RNR4YGR180C 1038 nt3.27□□□□□ -1.89
HCA4P20448 NMA111YNL123W 2994 nt3.27□□□□□ -1.89
HCA4P20448 YOR146WYOR146W 306 nt3.27□□□□□ -1.89
HCA4P20448 TSC3YBR058C-A 243 nt3.27□□□□□ -1.89
HCA4P20448 ITC1YGL133W 3795 nt3.27□□□□□ -1.89
HCA4P20448 MSB2YGR014W 3921 nt3.27□□□□□ -1.89
HCA4P20448 CDH1YGL003C 1701 nt3.27□□□□□ -1.89
HCA4P20448 MED1YPR070W 1701 nt3.27□□□□□ -1.89
HCA4P20448 YKL100CYKL100C 1764 nt3.26□□□□□ -1.89
HCA4P20448 ECM21YBL101C 3354 nt3.26□□□□□ -1.89
HCA4P20448 YER038W-AYER038W-A 381 nt3.26□□□□□ -1.89
HCA4P20448 tM(CAU)Q1tM(CAU)Q1 76 nt3.26□□□□□ -1.89
HCA4P20448 tW(UCA)QtW(UCA)Q 74 nt3.26□□□□□ -1.89
HCA4P20448 YLR302CYLR302C 363 nt3.26□□□□□ -1.89
HCA4P20448 HSP10YOR020C 321 nt3.26□□□□□ -1.89
HCA4P20448 YOR385WYOR385W 873 nt3.26□□□□□ -1.89
HCA4P20448 snR36snR36 182 nt3.26□□□□□ -1.89
HCA4P20448 BCH1YMR237W 2175 nt3.25□□□□□ -1.89
HCA4P20448 POM152YMR129W 4014 nt3.25□□□□□ -1.89
HCA4P20448 RPL29YFR032C-A 180 nt3.25□□□□□ -1.89
HCA4P20448 SHE2YKL130C 741 nt3.25□□□□□ -1.89
HCA4P20448 YPL080CYPL080C 327 nt3.25□□□□□ -1.89
HCA4P20448 TRZ1YKR079C 2517 nt3.25□□□□□ -1.89
HCA4P20448 TAO3YIL129C 7131 nt3.25□□□□□ -1.89
HCA4P20448 CWC22YGR278W 1734 nt3.24□□□□□ -1.89
HCA4P20448 GPI8YDR331W 1236 nt3.24□□□□□ -1.89
HCA4P20448 YER107W-AYER107W-A 321 nt3.24□□□□□ -1.89
HCA4P20448 RPS21BYJL136C 264 nt3.24□□□□□ -1.89
HCA4P20448 EXO84YBR102C 2262 nt3.24□□□□□ -1.89
HCA4P20448 VHR2YER064C 1518 nt3.24□□□□□ -1.89
HCA4P20448 DYN1YKR054C 12279 nt3.23□□□□□ -1.89
HCA4P20448 YIL169CYIL169C 2988 nt3.23□□□□□ -1.89
HCA4P20448 SEC7YDR170C 6030 nt3.23□□□□□ -1.89
HCA4P20448 YHL006W-AYHL006W-A 354 nt3.23□□□□□ -1.89
HCA4P20448 YHR007C-AYHR007C-A 216 nt3.23□□□□□ -1.89
HCA4P20448 COX7YMR256C 183 nt3.23□□□□□ -1.89
HCA4P20448 snR13snR13 124 nt3.23□□□□□ -1.89
HCA4P20448 YPL152W-AYPL152W-A 99 nt3.23□□□□□ -1.89
HCA4P20448 UTP13YLR222C 2454 nt3.22□□□□□ -1.89
HCA4P20448 ROM1YGR070W 3468 nt3.22□□□□□ -1.89
HCA4P20448 snR80snR80 171 nt3.22□□□□□ -1.89
HCA4P20448 YJL202CYJL202C 348 nt3.22□□□□□ -1.89
HCA4P20448 YLR230WYLR230W 306 nt3.22□□□□□ -1.89
HCA4P20448 COX14YML129C 213 nt3.22□□□□□ -1.89
HCA4P20448 ISF1YMR081C 1017 nt3.22□□□□□ -1.89
HCA4P20448 UBP14YBR058C 2346 nt3.22□□□□□ -1.89
HCA4P20448 RRT13YER066W 558 nt3.21□□□□□ -1.9
HCA4P20448 RPL39YJL189W 156 nt3.21□□□□□ -1.9
HCA4P20448 PAU23YLR037C 375 nt3.21□□□□□ -1.9
HCA4P20448 ISU1YPL135W 498 nt3.21□□□□□ -1.9
HCA4P20448 TFC1YBR123C 1950 nt3.21□□□□□ -1.9
HCA4P20448 YDR210W-BYDR210W-B 5313 nt3.21□□□□□ -1.9
HCA4P20448 YDR261W-BYDR261W-B 5313 nt3.21□□□□□ -1.9
HCA4P20448 YFL002W-AYFL002W-A 5313 nt3.21□□□□□ -1.9
HCA4P20448 YGR161W-BYGR161W-B 5313 nt3.21□□□□□ -1.9
HCA4P20448 YLR410W-BYLR410W-B 5313 nt3.21□□□□□ -1.9
HCA4P20448 YCL019WYCL019W 5313 nt3.21□□□□□ -1.9
HCA4P20448 NIC96YFR002W 2520 nt3.2□□□□□ -1.9
HCA4P20448 RRM3YHR031C 2172 nt3.2□□□□□ -1.9
HCA4P20448 YMR31YFR049W 372 nt3.2□□□□□ -1.9
HCA4P20448 LSM2YBL026W 288 nt3.2□□□□□ -1.9
HCA4P20448 YPR014CYPR014C 330 nt3.2□□□□□ -1.9
HCA4P20448 DIE2YGR227W 1578 nt3.2□□□□□ -1.9
HCA4P20448 SNF12YNR023W 1701 nt3.19□□□□□ -1.9
HCA4P20448 YOL057WYOL057W 2136 nt3.19□□□□□ -1.9
HCA4P20448 ATG13YPR185W 2217 nt3.19□□□□□ -1.9
HCA4P20448 YGR069WYGR069W 336 nt3.19□□□□□ -1.9
HCA4P20448 PET191YJR034W 327 nt3.19□□□□□ -1.9
HCA4P20448 SIP18YMR175W 240 nt3.19□□□□□ -1.9
HCA4P20448 RPB11YOL005C 363 nt3.19□□□□□ -1.9
HCA4P20448 YAT2YER024W 2772 nt3.19□□□□□ -1.9
HCA4P20448 BOI1YBL085W 2943 nt3.19□□□□□ -1.9
HCA4P20448 NDT80YHR124W 1884 nt3.18□□□□□ -1.9
HCA4P20448 PSK1YAL017W 4071 nt3.18□□□□□ -1.9
HCA4P20448 CAJ1YER048C 1176 nt3.18□□□□□ -1.9
HCA4P20448 ERP6YGL002W 651 nt3.18□□□□□ -1.9
HCA4P20448 RAD6YGL058W 519 nt3.18□□□□□ -1.9
HCA4P20448 YML037CYML037C 1023 nt3.18□□□□□ -1.9
HCA4P20448 BIL1YOR304C-A 231 nt3.18□□□□□ -1.9
HCA4P20448 DGK1YOR311C 873 nt3.18□□□□□ -1.9
HCA4P20448 SPC72YAL047C 1869 nt3.18□□□□□ -1.9
HCA4P20448 YDR183C-AYDR183C-A 258 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 46.8 ms