Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPL35AP18077 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.21■□□□□ 0.03
RPL35AP18077 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.21■□□□□ 0.03
RPL35AP18077 AL162412.1-201ENST00000567129 965 ntBASIC15.21■□□□□ 0.03
RPL35AP18077 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.21■□□□□ 0.03
RPL35AP18077 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.21■□□□□ 0.03
RPL35AP18077 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPL35AP18077 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPL35AP18077 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RPL35AP18077 AC116050.2-201ENST00000612102 1779 ntBASIC15.21■□□□□ 0.02
RPL35AP18077 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPL35AP18077 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RPL35AP18077 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.2■□□□□ 0.02
RPL35AP18077 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.2■□□□□ 0.02
RPL35AP18077 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RPL35AP18077 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RPL35AP18077 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.2■□□□□ 0.02
RPL35AP18077 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RPL35AP18077 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.2■□□□□ 0.02
RPL35AP18077 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RPL35AP18077 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.2■□□□□ 0.02
RPL35AP18077 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RPL35AP18077 GUSBP6-202ENST00000438529 1198 ntBASIC15.2■□□□□ 0.02
RPL35AP18077 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.2■□□□□ 0.02
RPL35AP18077 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RPL35AP18077 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.2■□□□□ 0.02
RPL35AP18077 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RPL35AP18077 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.2■□□□□ 0.02
RPL35AP18077 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.2■□□□□ 0.02
RPL35AP18077 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.2■□□□□ 0.02
RPL35AP18077 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPL35AP18077 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RPL35AP18077 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.19■□□□□ 0.02
RPL35AP18077 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RPL35AP18077 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RPL35AP18077 AL355472.2-201ENST00000422958 438 ntBASIC15.19■□□□□ 0.02
RPL35AP18077 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.19■□□□□ 0.02
RPL35AP18077 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.19■□□□□ 0.02
RPL35AP18077 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.19■□□□□ 0.02
RPL35AP18077 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RPL35AP18077 FAM21FP-204ENST00000608637 956 ntBASIC15.19■□□□□ 0.02
RPL35AP18077 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.19■□□□□ 0.02
RPL35AP18077 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.19■□□□□ 0.02
RPL35AP18077 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPL35AP18077 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.19■□□□□ 0.02
RPL35AP18077 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 AC010980.2-201ENST00000587099 1412 ntBASIC15.18■□□□□ 0.02
RPL35AP18077 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RPL35AP18077 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RPL35AP18077 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RPL35AP18077 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.18■□□□□ 0.02
RPL35AP18077 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 MIPEPP3-201ENST00000412105 444 ntBASIC15.18■□□□□ 0.02
RPL35AP18077 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.18■□□□□ 0.02
RPL35AP18077 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RPL35AP18077 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.18■□□□□ 0.02
RPL35AP18077 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RPL35AP18077 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RPL35AP18077 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.18■□□□□ 0.02
RPL35AP18077 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RPL35AP18077 FEM1AP4-201ENST00000443167 1987 ntBASIC15.18■□□□□ 0.02
RPL35AP18077 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RPL35AP18077 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RPL35AP18077 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPL35AP18077 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPL35AP18077 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPL35AP18077 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPL35AP18077 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPL35AP18077 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms