Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXB3P14651 AL024507.2-201ENST00000606070 2574 ntBASIC20.06■□□□□ 0.8
HOXB3P14651 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXB3P14651 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXB3P14651 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HOXB3P14651 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
HOXB3P14651 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXB3P14651 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXB3P14651 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXB3P14651 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXB3P14651 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.05■□□□□ 0.8
HOXB3P14651 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.05■□□□□ 0.8
HOXB3P14651 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.05■□□□□ 0.8
HOXB3P14651 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.05■□□□□ 0.8
HOXB3P14651 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
HOXB3P14651 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HOXB3P14651 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HOXB3P14651 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HOXB3P14651 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXB3P14651 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXB3P14651 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HOXB3P14651 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXB3P14651 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXB3P14651 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXB3P14651 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXB3P14651 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXB3P14651 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HOXB3P14651 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXB3P14651 AL355472.2-201ENST00000422958 438 ntBASIC20.04■□□□□ 0.8
HOXB3P14651 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXB3P14651 AC245052.3-201ENST00000450182 901 ntBASIC20.04■□□□□ 0.8
HOXB3P14651 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXB3P14651 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXB3P14651 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.04■□□□□ 0.8
HOXB3P14651 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXB3P14651 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXB3P14651 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXB3P14651 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HOXB3P14651 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXB3P14651 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXB3P14651 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXB3P14651 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HOXB3P14651 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXB3P14651 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXB3P14651 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXB3P14651 TPM4P1-201ENST00000436100 807 ntBASIC20.03■□□□□ 0.8
HOXB3P14651 AC026366.1-201ENST00000488803 879 ntBASIC20.03■□□□□ 0.8
HOXB3P14651 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXB3P14651 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXB3P14651 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXB3P14651 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXB3P14651 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXB3P14651 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXB3P14651 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXB3P14651 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HOXB3P14651 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXB3P14651 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HOXB3P14651 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
HOXB3P14651 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 PRKY-204ENST00000533551 1019 ntBASIC20.02■□□□□ 0.8
HOXB3P14651 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXB3P14651 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HOXB3P14651 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.02■□□□□ 0.8
HOXB3P14651 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXB3P14651 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXB3P14651 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
HOXB3P14651 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HOXB3P14651 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
HOXB3P14651 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
HOXB3P14651 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HOXB3P14651 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXB3P14651 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXB3P14651 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXB3P14651 LSM12P1-201ENST00000411836 588 ntBASIC20.01■□□□□ 0.79
HOXB3P14651 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.01■□□□□ 0.79
HOXB3P14651 TMPOP1-202ENST00000424642 1267 ntBASIC20.01■□□□□ 0.79
HOXB3P14651 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXB3P14651 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.01■□□□□ 0.79
HOXB3P14651 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXB3P14651 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.01■□□□□ 0.79
HOXB3P14651 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXB3P14651 FAM21FP-204ENST00000608637 956 ntBASIC20.01■□□□□ 0.79
HOXB3P14651 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXB3P14651 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXB3P14651 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXB3P14651 KRT17P1-201ENST00000399211 1546 ntBASIC20.01■□□□□ 0.79
HOXB3P14651 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXB3P14651 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms