Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.34■■□□□ 1.65
COL11A2P13942 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.34■■□□□ 1.65
COL11A2P13942 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.34■■□□□ 1.65
COL11A2P13942 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.34■■□□□ 1.65
COL11A2P13942 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.34■■□□□ 1.65
COL11A2P13942 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.34■■□□□ 1.65
COL11A2P13942 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
COL11A2P13942 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
COL11A2P13942 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.34■■□□□ 1.65
COL11A2P13942 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
COL11A2P13942 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
COL11A2P13942 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.34■■□□□ 1.65
COL11A2P13942 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.34■■□□□ 1.65
COL11A2P13942 P4HB-223ENST00000576390 439 ntTSL 4 BASIC25.34■■□□□ 1.65
COL11A2P13942 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
COL11A2P13942 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.34■■□□□ 1.65
COL11A2P13942 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL11A2P13942 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.34■■□□□ 1.65
COL11A2P13942 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.34■■□□□ 1.65
COL11A2P13942 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.33■■□□□ 1.65
COL11A2P13942 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL11A2P13942 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL11A2P13942 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL11A2P13942 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL11A2P13942 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.33■■□□□ 1.65
COL11A2P13942 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
COL11A2P13942 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.33■■□□□ 1.64
COL11A2P13942 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.33■■□□□ 1.64
COL11A2P13942 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
COL11A2P13942 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.32■■□□□ 1.64
COL11A2P13942 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.32■■□□□ 1.64
COL11A2P13942 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
COL11A2P13942 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL11A2P13942 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
COL11A2P13942 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
COL11A2P13942 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
COL11A2P13942 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.31■■□□□ 1.64
COL11A2P13942 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.31■■□□□ 1.64
COL11A2P13942 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.31■■□□□ 1.64
COL11A2P13942 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.31■■□□□ 1.64
COL11A2P13942 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.31■■□□□ 1.64
COL11A2P13942 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL11A2P13942 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
COL11A2P13942 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.31■■□□□ 1.64
COL11A2P13942 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.31■■□□□ 1.64
COL11A2P13942 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
COL11A2P13942 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.31■■□□□ 1.64
COL11A2P13942 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL11A2P13942 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL11A2P13942 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.3■■□□□ 1.64
COL11A2P13942 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL11A2P13942 AC124283.5-201ENST00000624661 1809 ntBASIC25.3■■□□□ 1.64
COL11A2P13942 C1orf229-201ENST00000623686 2258 ntBASIC25.3■■□□□ 1.64
COL11A2P13942 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.3■■□□□ 1.64
COL11A2P13942 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL11A2P13942 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL11A2P13942 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC25.3■■□□□ 1.64
COL11A2P13942 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.3■■□□□ 1.64
COL11A2P13942 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL11A2P13942 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL11A2P13942 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL11A2P13942 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.3■■□□□ 1.64
COL11A2P13942 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL11A2P13942 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.3■■□□□ 1.64
COL11A2P13942 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.3■■□□□ 1.64
COL11A2P13942 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.29■■□□□ 1.64
COL11A2P13942 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL11A2P13942 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL11A2P13942 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
COL11A2P13942 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.29■■□□□ 1.64
COL11A2P13942 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.29■■□□□ 1.64
COL11A2P13942 AF186192.3-201ENST00000583427 947 ntBASIC25.29■■□□□ 1.64
COL11A2P13942 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.29■■□□□ 1.64
COL11A2P13942 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL11A2P13942 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL11A2P13942 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
COL11A2P13942 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
COL11A2P13942 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.29■■□□□ 1.64
COL11A2P13942 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL11A2P13942 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL11A2P13942 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL11A2P13942 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL11A2P13942 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms