Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.47■□□□□ 0.87
THRAP10827 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
THRAP10827 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
THRAP10827 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.46■□□□□ 0.87
THRAP10827 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.46■□□□□ 0.87
THRAP10827 CNN2P6-201ENST00000439038 900 ntBASIC20.46■□□□□ 0.87
THRAP10827 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
THRAP10827 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
THRAP10827 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
THRAP10827 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.45■□□□□ 0.86
THRAP10827 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
THRAP10827 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.45■□□□□ 0.86
THRAP10827 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.45■□□□□ 0.86
THRAP10827 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
THRAP10827 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.45■□□□□ 0.86
THRAP10827 AC083906.2-201ENST00000511578 360 ntBASIC20.45■□□□□ 0.86
THRAP10827 AC142086.2-201ENST00000569753 217 ntBASIC20.45■□□□□ 0.86
THRAP10827 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.45■□□□□ 0.86
THRAP10827 AC053503.5-201ENST00000601508 636 ntBASIC20.45■□□□□ 0.86
THRAP10827 AC010536.3-201ENST00000620306 533 ntBASIC20.45■□□□□ 0.86
THRAP10827 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
THRAP10827 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.45■□□□□ 0.86
THRAP10827 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.45■□□□□ 0.86
THRAP10827 GABARAPL3-202ENST00000624044 1851 ntBASIC20.45■□□□□ 0.86
THRAP10827 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
THRAP10827 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.44■□□□□ 0.86
THRAP10827 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.44■□□□□ 0.86
THRAP10827 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 GUSBP6-202ENST00000438529 1198 ntBASIC20.44■□□□□ 0.86
THRAP10827 TSPY6P-201ENST00000448518 926 ntBASIC20.44■□□□□ 0.86
THRAP10827 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.44■□□□□ 0.86
THRAP10827 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.44■□□□□ 0.86
THRAP10827 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.44■□□□□ 0.86
THRAP10827 SLC7A5P2-201ENST00000553010 536 ntBASIC20.44■□□□□ 0.86
THRAP10827 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.44■□□□□ 0.86
THRAP10827 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.44■□□□□ 0.86
THRAP10827 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
THRAP10827 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
THRAP10827 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.43■□□□□ 0.86
THRAP10827 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.43■□□□□ 0.86
THRAP10827 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.43■□□□□ 0.86
THRAP10827 SLC7A5P1-201ENST00000568957 537 ntBASIC20.43■□□□□ 0.86
THRAP10827 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
THRAP10827 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
THRAP10827 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
THRAP10827 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THRAP10827 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
THRAP10827 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THRAP10827 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THRAP10827 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THRAP10827 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.42■□□□□ 0.86
THRAP10827 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
THRAP10827 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
THRAP10827 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.42■□□□□ 0.86
THRAP10827 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms