Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 PNMA6B-201ENST00000538162 1200 ntBASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 AC142381.4-202ENST00000563973 229 ntBASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 AC073648.6-201ENST00000641589 218 ntBASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB40ALP0C0E4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 AC008403.3-201ENST00000598924 454 ntBASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB40ALP0C0E4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 UNC93B4-201ENST00000505679 747 ntBASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 AC092368.3-202ENST00000574180 1591 ntBASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB40ALP0C0E4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 PGM5P4-201ENST00000421970 445 ntBASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB40ALP0C0E4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 AC087633.2-202ENST00000565166 1439 ntBASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 AL158047.1-201ENST00000445918 881 ntBASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB40ALP0C0E4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB40ALP0C0E4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms