Protein–RNA interactions for Protein: P09919

CSF3, Granulocyte colony-stimulating factor, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3P09919 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF3P09919 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF3P09919 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CSF3P09919 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.36■□□□□ 0.53
CSF3P09919 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
CSF3P09919 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.36■□□□□ 0.53
CSF3P09919 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 AC006015.1-201ENST00000429970 570 ntBASIC18.36■□□□□ 0.53
CSF3P09919 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CSF3P09919 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSF3P09919 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.36■□□□□ 0.53
CSF3P09919 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CSF3P09919 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.36■□□□□ 0.53
CSF3P09919 AC018445.3-201ENST00000624177 1945 ntBASIC18.36■□□□□ 0.53
CSF3P09919 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CSF3P09919 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CSF3P09919 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.35■□□□□ 0.53
CSF3P09919 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSF3P09919 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.35■□□□□ 0.53
CSF3P09919 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSF3P09919 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.35■□□□□ 0.53
CSF3P09919 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.35■□□□□ 0.53
CSF3P09919 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CSF3P09919 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CSF3P09919 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CSF3P09919 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF3P09919 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.34■□□□□ 0.53
CSF3P09919 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.34■□□□□ 0.53
CSF3P09919 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSF3P09919 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CSF3P09919 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.34■□□□□ 0.53
CSF3P09919 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CSF3P09919 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSF3P09919 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF3P09919 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.34■□□□□ 0.53
CSF3P09919 KRT18P11-201ENST00000435214 1283 ntBASIC18.34■□□□□ 0.53
CSF3P09919 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.34■□□□□ 0.53
CSF3P09919 SMUG1P1-201ENST00000590640 811 ntBASIC18.34■□□□□ 0.53
CSF3P09919 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.34■□□□□ 0.53
CSF3P09919 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF3P09919 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF3P09919 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.34■□□□□ 0.53
CSF3P09919 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CSF3P09919 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF3P09919 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CSF3P09919 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF3P09919 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF3P09919 AC006128.1-201ENST00000624704 1661 ntBASIC18.34■□□□□ 0.53
CSF3P09919 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSF3P09919 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CSF3P09919 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.34■□□□□ 0.53
CSF3P09919 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSF3P09919 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSF3P09919 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSF3P09919 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.53
CSF3P09919 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSF3P09919 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CSF3P09919 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSF3P09919 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CSF3P09919 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CSF3P09919 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.33■□□□□ 0.52
CSF3P09919 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.33■□□□□ 0.52
CSF3P09919 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSF3P09919 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.33■□□□□ 0.52
CSF3P09919 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CSF3P09919 AC080038.1-201ENST00000611274 1154 ntBASIC18.33■□□□□ 0.52
CSF3P09919 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF3P09919 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF3P09919 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF3P09919 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF3P09919 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF3P09919 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF3P09919 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSF3P09919 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF3P09919 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSF3P09919 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.32■□□□□ 0.52
CSF3P09919 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSF3P09919 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.32■□□□□ 0.52
CSF3P09919 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms