Protein–RNA interactions for Protein: P08138

NGFR, Tumor necrosis factor receptor superfamily member 16, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFRP08138 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.81■□□□□ 0.6
NGFRP08138 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.81■□□□□ 0.6
NGFRP08138 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NGFRP08138 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
NGFRP08138 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
NGFRP08138 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NGFRP08138 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NGFRP08138 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NGFRP08138 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NGFRP08138 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.81■□□□□ 0.6
NGFRP08138 AC026185.1-201ENST00000445748 174 ntBASIC18.81■□□□□ 0.6
NGFRP08138 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.81■□□□□ 0.6
NGFRP08138 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NGFRP08138 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.81■□□□□ 0.6
NGFRP08138 OR10C1-204ENST00000622521 1039 ntBASIC18.81■□□□□ 0.6
NGFRP08138 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
NGFRP08138 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.81■□□□□ 0.6
NGFRP08138 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
NGFRP08138 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.8■□□□□ 0.6
NGFRP08138 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NGFRP08138 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NGFRP08138 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NGFRP08138 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.8■□□□□ 0.6
NGFRP08138 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.8■□□□□ 0.6
NGFRP08138 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.8■□□□□ 0.6
NGFRP08138 AC005181.1-201ENST00000604782 1256 ntBASIC18.8■□□□□ 0.6
NGFRP08138 AC092666.2-201ENST00000613287 246 ntBASIC18.8■□□□□ 0.6
NGFRP08138 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.8■□□□□ 0.6
NGFRP08138 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 AP005212.1-201ENST00000581547 1997 ntBASIC18.8■□□□□ 0.6
NGFRP08138 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.8■□□□□ 0.6
NGFRP08138 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NGFRP08138 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
NGFRP08138 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NGFRP08138 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
NGFRP08138 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NGFRP08138 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
NGFRP08138 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.79■□□□□ 0.6
NGFRP08138 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NGFRP08138 AC007225.1-201ENST00000566331 1836 ntBASIC18.79■□□□□ 0.6
NGFRP08138 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NGFRP08138 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NGFRP08138 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 PGM5P4-201ENST00000421970 445 ntBASIC18.79■□□□□ 0.6
NGFRP08138 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.79■□□□□ 0.6
NGFRP08138 MIR2861-201ENST00000636310 90 ntBASIC18.79■□□□□ 0.6
NGFRP08138 AC008694.1-202ENST00000636953 945 ntBASIC18.79■□□□□ 0.6
NGFRP08138 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
NGFRP08138 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NGFRP08138 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NGFRP08138 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.78■□□□□ 0.6
NGFRP08138 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.78■□□□□ 0.6
NGFRP08138 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NGFRP08138 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NGFRP08138 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NGFRP08138 AL512625.2-201ENST00000417533 625 ntBASIC18.78■□□□□ 0.6
NGFRP08138 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.78■□□□□ 0.6
NGFRP08138 AC133552.2-202ENST00000575694 574 ntBASIC18.78■□□□□ 0.6
NGFRP08138 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.78■□□□□ 0.6
NGFRP08138 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.78■□□□□ 0.6
NGFRP08138 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NGFRP08138 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 SLC25A24-204ENST00000569674 2357 ntBASIC18.77■□□□□ 0.6
NGFRP08138 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 AC087633.2-202ENST00000565166 1439 ntBASIC18.77■□□□□ 0.6
NGFRP08138 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.77■□□□□ 0.6
NGFRP08138 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.77■□□□□ 0.6
NGFRP08138 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
NGFRP08138 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
NGFRP08138 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NGFRP08138 CYP21A1P-202ENST00000354927 1481 ntBASIC18.77■□□□□ 0.59
NGFRP08138 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NGFRP08138 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NGFRP08138 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms